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Submitted SNP(ss) Details: ss87152844           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-2715336
RefSNP(rs#)rs62101625
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=A|Alt=G|Chr=chr1|Position=8867|Strand=+|dbSNP=+|Score=541|Reads=23:23:44

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87152844|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 CTGCAGAGGG GGAACGGAGA CCGGAGGCTG AGACTGGCAA GGCTGGACCT GAGTGTCGTC
 ACCTAAATTC AGACGGGGAA CTGCCCCTGC ACATACTGAA CGGCTCACTG AGCAAACCCC
 GAGTCCCGAC CACCGCCTCA GTGTGGTCTA GCTCCTCACC TGCTTCCATC CTCCCTGGTG
 CGGGGTGGGC CCAGTGATAT CAGCTGCCTG CTGTTCCCCA GATGTGCCAA GTGCATTCTT
 GTGTGCTTGC
 R
 TCTCATGGAA CGCCATTTCC CCAGACATCC CTGTGGCTGG CTCCTGATGC CCGAGGCCCA
 AGTGTCTGAT GCTTTAAGGC ACATCACCCC ACTCATGCTT TTCCATGTTC TTTGGCCGCA
 GCAAGGCCGC TCTCACTGCA AAGTTAACTC TGATGCGTGT GTAACACAAC ATCCTCCTCC
 CAGTCGCCCC TGTAGCTCCC CTACCTCCAA GAGCCCAGCC CTTGCCCACA GGGCCACACT
 CCACGTGCAG

  Submitted Frequency for ss87152844 back to top
There is no frequency submission for ss87152844.


  dbSNP summary of Genotypes for ss87152844 back to top
No sufficient data to compute Hardy-weinberg probability for ss87152844.


  Submitted individual genotype for ss87152844 back to top
There is no individual genotype data for ss87152844.