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Submitted SNP(ss) Details: ss87155972           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0000138
RefSNP(rs#)rs2905062
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=A|Chr=chr1|Position=774913|Strand=+|dbSNP=+|Score=167|Reads=7:7:9

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87155972|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 GTGAGAGAAA GTGTGGTGTT CACTCATTGC TCTTCCTTCT GGCTTTTATT TTTCTCACTT
 TTAGAGAAAA TAAGAGAAGT ATCCCTGAAG GATGAAATAT CCTCGAATAT GAAAAGGTCT
 GCTCTCTGAA GACCAACTGT CTCAGTCTGC TTTTTGCTGC TGTAACAGAA TACCACAGAC
 TTGGTAATTT ATAAACAGTA GAAGTCCATG TGGCTTATGC TTCTGGAGGC TGGGAAGTCC
 CAGGTTAAGG
 R
 GCTGCATCCG GCAAGGGCTT CTCGCTGCCT TATCACATGG CAGAAGGCAC CTTGTGGTGA
 GACAGTGAGG AAGGGCTGAT TTCACTCTCA CAACAAACCC ACTCCCATGA TAATGGCATT
 AATCCATTCA GCAGGGCAGA GCCTTCGTGA CCCCATCACC TCTTAAGGCT CCCGCTCAGC
 ATGGTTGCAC TGGGGTTAAA TTTCTAACAC CTGAACTTTG GGGACATGTT CAAACCATAG
 CCAGGGCCCT

  Submitted Frequency for ss87155972 back to top
There is no frequency submission for ss87155972.


  dbSNP summary of Genotypes for ss87155972 back to top
No sufficient data to compute Hardy-weinberg probability for ss87155972.


  Submitted individual genotype for ss87155972 back to top
There is no individual genotype data for ss87155972.

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