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Submitted SNP(ss) Details: ss87156394           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0000186
RefSNP(rs#)rs6671445
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=C|Chr=chr1|Position=811811|Strand=+|dbSNP=+|Score=48|Reads=2:2:2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87156394|allelePos=251|len=501|taxid=9606|alleles='T/C'|mol=Genomic
 GATAGCAGCT ACCCCTCTCC CTGGGGACTT CATCCCAGGG AGAAATCAGA GTTCTGTCCA
 TAGAACTCTG GCTGGAGTTG CTAAAATTCC AATGGGGAGG CCCTGTCCAG TGAGGAGGGA
 TGTGTTTTGG TCTCACTTAA AGAAGCAGCC TGGCCACAAT CAGGCACAGC AGCTGTGCTG
 TGTTATGGGA AACTCCTCCT GGACCCTGGT GCCAGCAGGC TAGAGTGGCC AACTCAAACC
 ACAGATATAG
 Y
 GGCTGCCCTT CCCTCCAGGA ACTCGGTCCA TCTCTGGCTG TCTCCAGCCT GCTGCCTCTG
 GCCAGCTGGA ATTCCAAGCC AATGGGTTTT GTGAGGTGCT GTGGGAGTGG GGCCTCAGAA
 TGATGTCACT TGGCTCCCTG GATTCAGCCC CCTTCCTAGG GGAATGCACA GATGTATCTC
 CCACTTTGCT GGAATTCTCG GGGCATAGGA TGCAAAACTC CTGGGTTTCC ACGCATGCCC
 CAGTGAGCCA

  Submitted Frequency for ss87156394 back to top
There is no frequency submission for ss87156394.


  dbSNP summary of Genotypes for ss87156394 back to top
No sufficient data to compute Hardy-weinberg probability for ss87156394.


  Submitted individual genotype for ss87156394 back to top
There is no individual genotype data for ss87156394.

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