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Submitted SNP(ss) Details: ss87158209           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0000504
RefSNP(rs#)rs11807848
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=C|Chr=chr1|Position=1051029|Strand=+|dbSNP=+|Score=65|Reads=3:3:11

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87158209|allelePos=251|len=501|taxid=9606|alleles='T/C'|mol=Genomic
 GGCTGAGCTG GGCCTTTTAT GCAGGAATGG ACGCCCTTGG GGTCAGCCTC AGGGGTTAAC
 CCTTAGCATC CTCTCAGGCC AGGATTCCAG GAAAGATGTT TCCTCCACAG GCCCTCAAGT
 TACCCCAGGG CAAAGAGTGG ATGGCCCAGG CCCTGTGCAG AAAGAGTCCT GGGTCCTCCG
 TCCTCTTCCA ACCTCCTGCT GAGAGTCCCA GGCAAGCACA GATTCCCAGG CTGGGGTATC
 CCATCCAGAC
 Y
 TTCGCCCTCT GTACCCTTCG TGCTGGGCCT GGGGTGGAGT GTACTTGGAG GGGACCCATC
 CTCAATCCAC CTCGTTCCGG AGAGCTGAGC CCTCAAGAAG CCCAGGAGAG CAGCTCGGGG
 GAGCACGGAC CCTGCTTCCA GCCCTGGGCC ATTCGCCCGC TGGAAAAAAA TCCCCAAAAT
 TTGCTGATAA ATATAAGAAA GTCACAGCAG CCTTCAAACA AGCAGACTCC ATAGACAGAC
 TCCAGAACCG

  Submitted Frequency for ss87158209 back to top
There is no frequency submission for ss87158209.


  dbSNP summary of Genotypes for ss87158209 back to top
No sufficient data to compute Hardy-weinberg probability for ss87158209.


  Submitted individual genotype for ss87158209 back to top
There is no individual genotype data for ss87158209.