Submitter | Handle | BCMHGSC_JDW | Submitter SNP ID | JWB-0000620 | RefSNP(rs#) | rs12142199 | Submitted Batch ID | JWB_snps_no_apoe | Submitted Date | Feb 26, 2008 | Publication Cited | [1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing | First entry to dbSNP | Feb 26 2008 12:00:00:000AM |
| Resource Links | Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | JWB_SNP_DISCOVERY | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | N.D. |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | Ref=G|Alt=A|Chr=chr1|Position=1239050|Strand=+|dbSNP=+|Score=59|Reads=3:3:4 |
>gnl|dbSNP|ss87159005|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic CCCAGCGTGC AGCATTCCTG GCGTGGCAAA CACAACCTAC AGGACACACA GGGCCAGGTG
GGGGGTCAGG GCAGCAGATG CCCCCACCCC CACTGCAGGC CCAAGCCCAG ACACCTGCGG
AAGACAGGAG ACCGACGGGT GTGGATGTGC TGGCCGGCCC TGCCGCGGGC CTCACCATCG
GTCCTGGGTT GTCAGCAAAA GCCCGGTCGA AGGCCTTGAT GTGCTTGAAC TCAAACATGT
TCCTCTGCAC
R
AAAGTCTTGC GGATCTTCTG GTTGGTCCAG GGGATGAACA GCTTGTAGTA GTGGTTGGCC
TTCTCGGTCA GCCCCGTGGA GAAGTAGATG GGCACCTTCA GGTTCATGCG CTCCCTGGGG
ACCACCGGCC CAGTCAGCAC AGTGGCCACA GGGGAGAATG CTGCAGGGCA GGACTCGGCC
GGGTCACCCC CAACACCCGT GTCTGCACAG CCCACGCACG GGCCAGGTTG AGTCCAGTCG
CGACCACTTG
There is no frequency submission for ss87159005.
No sufficient data to compute Hardy-weinberg probability for ss87159005.
There is no individual genotype data for ss87159005.
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