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Submitted SNP(ss) Details: ss87169549           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0002012
RefSNP(rs#)rs3100865
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=G|Chr=chr1|Position=2795967|Strand=+|dbSNP=+|Score=40|Reads=2:2:5

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87169549|allelePos=251|len=501|taxid=9606|alleles='T/G'|mol=Genomic
 GATGGACACA GAAGAGCCAC CCCCAGGCTC CCAGGGCCCC GAGGACACAG CATGAGCTTC
 ATCTACATGG GTGGGGGACG GCGGCTTGGG GCCTTGATTC AGGTGCTGGG GCCCCTTCTG
 TCCCTGTCCC TGCCCTGAGG ACTGTTGGGG TCAACCCTGG CTGAGTGTGG ACGTTGCTGG
 TTCAGCGGAT ACCCTGAGTG CCGAGGCCAG GTAGGCCGCT GGGGCTCAGG GGGACAGGCT
 GGCTGAGGAC
 K
 CTGGGGATCA CGAGTCCGTG GTGGGCTTTG GAGCCAGCCT GGGTGGGGCT CCAGGTGGGG
 ACAGAGGAGG CTCTGTGTCT GGGCTCTGGG GGCCCCGCTG GAAGAGGCCA AGGACATCAG
 AACTGACGGG AGGACCAGGA AGGGGTGGCC GGGGGCTGAG GGAGGTGGGG AAGTCGGGGG
 CCCGAAGCCA AGGGTGGGGG CCGAGCTGTG GGGAGCTGAG GCCTGTGACC CATGCTTGGT
 GGGGGTGACC

  Submitted Frequency for ss87169549 back to top
There is no frequency submission for ss87169549.


  dbSNP summary of Genotypes for ss87169549 back to top
No sufficient data to compute Hardy-weinberg probability for ss87169549.


  Submitted individual genotype for ss87169549 back to top
There is no individual genotype data for ss87169549.

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