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Submitted SNP(ss) Details: ss87174355           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0002802
RefSNP(rs#)rs7530315
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=A|Alt=T|Chr=chr1|Position=3715302|Strand=+|dbSNP=+|Score=68|Reads=3:3:8

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87174355|allelePos=251|len=501|taxid=9606|alleles='A/T'|mol=Genomic
 TAATCCCAGC ACTTTGGGAG GCTGAGGTGG GAGGATCAGT TGAGCTCAGG AGTTCCAGAC
 CAGCCTGGGC AACATAGTGA GATTCCCCTG TACAAAAATG TAAAAATTAG CTGGGTGTGG
 TGGCATGTGC CTGTAGTTCC AGCTACTGAG GAGGCTGAGG CAGGAGGATC AGTTGAGCCC
 AGGAGGTTGA AGGTTGCAAC CAGCTGAGAT CACACCACTG CACTGCAGTC TGGATGACAG
 AGCAAGACCC
 W
 ATCTCAAACA ATAATAAACA AAGAGGATCA GGTGTCTTAG TCTGCTTGTT ATAACAAAAT
 ACCTGAGACA GGGTAATTTA TAGAAAGCAG AGGTTTCTTT CTAACAGCCG TGGAGGCTGG
 GAGTCCAAGC ATCCTCTGGA GGGAGAGAGG GAAGGCAGGC TGTGTCCTCA CAGGGTGGAA
 GGTGGAGGGG GATCCCACAC CCAAGACCCC CCACCCACTT TTTTTTTTGA GATGGAGTTT
 CACTCTTGTT

  Submitted Frequency for ss87174355 back to top
There is no frequency submission for ss87174355.


  dbSNP summary of Genotypes for ss87174355 back to top
No sufficient data to compute Hardy-weinberg probability for ss87174355.


  Submitted individual genotype for ss87174355 back to top
There is no individual genotype data for ss87174355.