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Submitted SNP(ss) Details: ss87174407           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0002813
RefSNP(rs#)rs9286791
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=C|Alt=T|Chr=chr1|Position=3723326|Strand=+|dbSNP=+|Score=130|Reads=6:6:9

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87174407|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TCTGAGCACA GCAGAGCGTG CACGCAAATG CAAGGGTGAG AAGCAGAGCG CCCGCGTGAT
 TACGTTCCAG GCCAGAAGAC AGAACGCGCC AGGCACCGCG GGCTCCCCGC CAGCCTGCTG
 CCCACGGTTC CTCGTGGGGT TCCCACTCTC TTCATCCCTG CTCTTCCTGA GCCACGCCAC
 ATGCACTTGC CCTGCAGAAT GTGGGGCTTA TGCAGGCCTG ACTGCCTGGG CAGCCAGCTT
 CTTTCCTTTA
 Y
 GACCAGCTGT GGGACCGTCT GCATGGGGAC AGGGAGCTCA TCTCGTCCTC CTGTTGGATA
 TAAACGCGGG ATCGCTGGTT CCCTGAGTCT TCTGGACATT CGAGTTGTTC CTGGTTCCTT
 CCCTTCTATT TAAACAACAC TCACGAGGCT GGGCGCGGTG GCTCACGCCT GTAATCCCAA
 CACTTTGGGA GGCAGAGGTG GGTGGATCAC CTGAGGTCAG GATTTTGAGA CCAGCCTGGC
 CAGCTTGGTG

  Submitted Frequency for ss87174407 back to top
There is no frequency submission for ss87174407.


  dbSNP summary of Genotypes for ss87174407 back to top
No sufficient data to compute Hardy-weinberg probability for ss87174407.


  Submitted individual genotype for ss87174407 back to top
There is no individual genotype data for ss87174407.