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Submitted SNP(ss) Details: ss87656660           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0092441
RefSNP(rs#)rs7554246
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=C|Chr=chr1|Position=99848283|Strand=+|dbSNP=+|Score=112|Reads=5:5:8

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87656660|allelePos=251|len=501|taxid=9606|alleles='T/C'|mol=Genomic
 TGACCTATTT TCTGTCTATA CTTTTGCCTT TCCAGAATGT CATATGAATG AAATAATACG
 ATATGTATCC TTTAGGATCT GGCTTCTTCC CCTTAGTAAA ATGCATTTAA GATTCATCAT
 GTTGTTGTAG GAATCAATTG CTCATTCTTT TTTATTGCAG AGTAGTGTAC CATGGAATGT
 ATACACCACA GTTTGTCTAT CCATTCCCCT GCTGAAAGAC ATCTTCACTG TTTCCAGTTT
 TTAGTAATTA
 Y
 GGATAAAGCT GCTCCAAACA TTTATGTGCA AGTTTTTGAA TGAATATAAA TTTTCAACTC
 ACTTGAGAAA TACCTAGGAG TATGACTTCT GGGTCATATG GTAAGTGTAT GTTTAACTTT
 ATGAGAAACT GGCAAATGGC TTTCCAGAGG CTTTTAAAAA ATATTACAGC ATAGACTGCA
 GGTTGAAAAG CAGTCTTAAA TCAGTTCAAC CATAAAATTC AATATAGCAT TAAGCATTAA
 TAGTTTATCA

  Submitted Frequency for ss87656660 back to top
There is no frequency submission for ss87656660.


  dbSNP summary of Genotypes for ss87656660 back to top
No sufficient data to compute Hardy-weinberg probability for ss87656660.


  Submitted individual genotype for ss87656660 back to top
There is no individual genotype data for ss87656660.

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