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Submitted SNP(ss) Details: ss87916062           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0163567
RefSNP(rs#)rs10801171
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=C|Alt=G|Chr=chr1|Position=191309639|Strand=+|dbSNP=+|Score=154|Reads=6:6:8

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87916062|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 CGATCTTGGC CCACTGTAAC CTCTGCCTCC TCAGTTCAAG TGATTCTCCT GCCTCAGCCT
 CCTGAGTAGC TGGTATTACA GGCATGTGCC ACCACGCCCA GCTAATTTTT TTTTATTATA
 CTTTAAGTTC TAGGGTACAT GTGCACAACG TGCAGGTTTG TTACATATGT ATACATGTGC
 CATGTTGGTG TGCTGCACCC ATTAACTCGT CATTTAACGT TACGTATATC TCCTAATGCT
 ATCCCTCCCC
 S
 CTCCCCCCAC CCCACAACAG GCCCTGGTGT GTGATGTTCC CCTTCCTGTG TCCATGTGTT
 CTCATTGTTC AATTCCCACC TATGAGTGAG AACATGCAGT GTTTCGTTTT TTGTCCTTGC
 GATAGTTTGC TGAGAATGAT GGTTTCCAGC TTCATCCATG TCCCTACAAA GGACATGAAC
 TCATCCTTTT TATGGCTGCA TAGTATTCCA TGGTGTATAT GTGCCACATT TTCTTAATCC
 AGTCTATCAT

  Submitted Frequency for ss87916062 back to top
There is no frequency submission for ss87916062.


  dbSNP summary of Genotypes for ss87916062 back to top
No sufficient data to compute Hardy-weinberg probability for ss87916062.


  Submitted individual genotype for ss87916062 back to top
There is no individual genotype data for ss87916062.

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