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Submitted SNP(ss) Details: ss87925765           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0167551
RefSNP(rs#)rs203674
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=T|Chr=chr1|Position=194951248|Strand=+|dbSNP=+|Score=77|Reads=4:4:5

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87925765|allelePos=251|len=501|taxid=9606|alleles='G/T'|mol=Genomic
 TTACAAAATT CTGTTATGAT TTTCTTTAAA AAATAATGTA TACCTGTAAT GGCCTGTTTT
 ATTACTAGCA TTGTCATAAA TGCTTTAGTA TAAATGAATT AAGAAAAATG TTTTTAAAAT
 ATATTTTGGG GCTTAAGCAA TGAAAAAAAA TGTTGTGTAG AAAGATATAC TTTCACTTTT
 GACAACTATT TTACGACAAC AAATTCTCAC CAGTCATAGA TTATTTTTGT ACGGTACCTA
 TTTATTAGTA
 K
 ATCTAATCAA TAAAGCTTTT TCTTCTTAGA ATGGGAAATA CTCAGATTGT TTATTAGATG
 ACATTAGAAA TGACATTCTA AATTTTTTAT GCACTAGAAT CTTGTGATAT CCCAGTATTT
 ATGAATGCCA GAACTAAAAA TGACTTCACA TGGTTTAAGC TGAATGACAC ATTGGACTAT
 GAATGCCATG ATGGTTATGA AAGCAATACT GGAAGCACCA CTGGTTCCAT AGTGTGTGGT
 TACAATGGTT

  Submitted Frequency for ss87925765 back to top
There is no frequency submission for ss87925765.


  dbSNP summary of Genotypes for ss87925765 back to top
No sufficient data to compute Hardy-weinberg probability for ss87925765.


  Submitted individual genotype for ss87925765 back to top
There is no individual genotype data for ss87925765.

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