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Submitted SNP(ss) Details: ss87993536           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0194673
RefSNP(rs#)rs747657
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=C|Chr=chr1|Position=224617547|Strand=+|dbSNP=+|Score=129|Reads=5:5:5

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87993536|allelePos=251|len=501|taxid=9606|alleles='G/C'|mol=Genomic
 AGATAAAATG AATCTCCAGC TGTTTGACAG CCAGCCACAA GGCAGCCTTC TCAGGACAGC
 AAGCCCCCGG CTTCTGTGCT GTCCAGGGTG CCTCGGGCTG TAGCAACAGC TTTGGAAACA
 CTTTACCTTT GACACTGTGC TTGCCCTTGG GTAACTTGCT GATATGTGAA GCGTGCTTCA
 GTTCATACCT ATTCAAAAGA GGACAGTCTC AGAAGAGGCC TTCACACTGG GCTCTCGAAA
 CCAACAGTTT
 S
 ATTAGGAGAA TAAGATCAGA TACAGAGATG AGATAAAAGT CCACAAAACC CAGACCATCT
 AAACTGCTCA GGCTCCCTCC TGAGTTTCTG GAACTGTTCC AGAACCTGAA ACTGCAGTTG
 CGGCTGAACA TAGTTTGTGC CCAGCGATCA CTGCTATGGG GCCATTTTCA AGGCAAGGCC
 CTATTTGGAG TGGTGGTCAG CAGCTCTAGG TTTCCGTCCA CATTCCACAG TCCCCAGACC
 CCTGGCCTTT

  Submitted Frequency for ss87993536 back to top
There is no frequency submission for ss87993536.


  dbSNP summary of Genotypes for ss87993536 back to top
No sufficient data to compute Hardy-weinberg probability for ss87993536.


  Submitted individual genotype for ss87993536 back to top
There is no individual genotype data for ss87993536.

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