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Submitted SNP(ss) Details: ss88080913           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0229400
RefSNP(rs#)rs11817774
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=A|Chr=chr10|Position=6347912|Strand=+|dbSNP=+|Score=145|Reads=6:6:6

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss88080913|allelePos=251|len=501|taxid=9606|alleles='T/A'|mol=Genomic
 GGGGAAACAC TGGTGCCACG AAGACATCCT ACTCCTCATC CAAATTTCTT TTTAAGTTTA
 GCTTTCACTG ATGATTCTTG TCTCAACCAA TCTTTGCTAT AATGATTGCA GAAACATAAT
 TTTCCAGCTC CACCCCCTCC TTCTGTGTTT ATTGTTCAGG ATTCTGCTGT CAGGAGGAGA
 CTTCTCTTGT CCTTCATTTT TTTTTTTGTT TTTCTATTTA TTATTATCAT TTTTTAGAGA
 CTGGGTCTAG
 W
 TCTGTTACGT AGGTGGGAGT GCAGTGGCAT GATCATAGCT CACTGCAGCC TTGACCTCCT
 GCGCTCAAGG AATCCTCCTG CCTTAGCCTC CTGAGTAGCT AGGTCTATAG GCTTGTGCCC
 CACGCCTGGT TATTTTAAAT TTTTTTGTAG AGACAAGGCC TTACTATGTT GCCCAGGCTG
 GTCTCAAACT CTTGGGCTCA AGTGATCCTT CTGCCTCGGC CTCTCAAATT GTTGGGATTA
 CAGGCATGAG

  Submitted Frequency for ss88080913 back to top
There is no frequency submission for ss88080913.


  dbSNP summary of Genotypes for ss88080913 back to top
No sufficient data to compute Hardy-weinberg probability for ss88080913.


  Submitted individual genotype for ss88080913 back to top
There is no individual genotype data for ss88080913.

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