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Submitted SNP(ss) Details: ss88080937           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0229411
RefSNP(rs#)rs1544198
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=A|Chr=chr10|Position=6354227|Strand=+|dbSNP=+|Score=158|Reads=7:7:10

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss88080937|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 GAGGATAGAC CAGAGGGTGG GATAGACAGT TGCCCCTGCC CCGATGGTGG CTGCCATCCA
 GCAGGGAGGG CAGATGTGAA GCATTACATA CGTGCTTACT TGCCATTGTG CATGTATGTT
 GTATGTTATG AACAAGTGCA AAGCACCCCG AGTTCACAGA CAGGGGCTGT AACTGTCTAG
 TTTGGTGAAT GGCTGATGAA GGCAGTGCTG GGAGATGATA AATGTCCCTT CTGTCCCTTA
 GGACTTGCAG
 R
 TAATGGTCTC CTGTGTCCCT CCCTTGACTC CAGGCTGTCT AGTGAAGGTG ATCGTTCCAA
 TTGCCCTATT AGGACATCGG GGTTTCTTAA CTAAACCCTG AATGATGCCT TGGATTTATG
 CATTCTGGCC AACGTGTTGA AATACGTCAG TCTGGCTGGG CACGGTGGCT CATGCCTGTA
 ATCCTAGCAC TTTGGGAGGC CGAGGCGGGC GGATCACCTG AGGTCAGGAG TTTGAGACCA
 GCCTGGCCAA

  Submitted Frequency for ss88080937 back to top
There is no frequency submission for ss88080937.


  dbSNP summary of Genotypes for ss88080937 back to top
No sufficient data to compute Hardy-weinberg probability for ss88080937.


  Submitted individual genotype for ss88080937 back to top
There is no individual genotype data for ss88080937.

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