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Submitted SNP(ss) Details: ss88235998           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0288919
RefSNP(rs#)rs2456774
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=C|Alt=T|Chr=chr10|Position=62216320|Strand=+|dbSNP=+|Score=40|Reads=2:2:2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss88235998|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TATGTTCACT TTGTATGTAT ATAAAGATTT TTTTTTTTAC ACAAGGTGGA CTTATTTGCA
 TATGTATATA TACATATTTT CCCTTTTTTG TGTAAAACAT TATCAAGACG TAGATCTACC
 TATGTCTATT TACATTTTTG ATATAATTAA ACCACTTCCA TATTGATGAA CATTTAAATT
 ATTTTCCAAC TTGGTTATTG TTGCTCTTAT TAACAGTACT GCACTGAATG TCCTTATAGA
 TATTTATCTT
 Y
 GTATGCAACT TTATAGGATA AATTTTTAGA ATGGGAATGA TGGATTGAAG ATGTTTATTT
 ACATTTTGAT AGATATTGCC GGTTGCCCCC TAAAAAACTT GTAGCAATTT ACTCTTAAAT
 ACTCATGGTG TGTAATACTT ATTGTTTTAG TACATCATTG CCAAAACTTG GTTTTATCAA
 TCTGTTAACT ATGTGAAAAA GGCATATTAA GATTGTTTTA ATTTTATATT TCATGACAAT
 TTAACACTTC

  Submitted Frequency for ss88235998 back to top
There is no frequency submission for ss88235998.


  dbSNP summary of Genotypes for ss88235998 back to top
No sufficient data to compute Hardy-weinberg probability for ss88235998.


  Submitted individual genotype for ss88235998 back to top
There is no individual genotype data for ss88235998.

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