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Submitted SNP(ss) Details: ss89022795           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0531387
RefSNP(rs#)rs1492138
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=A|Alt=T|Chr=chr12|Position=21921445|Strand=+|dbSNP=+|Score=123|Reads=6:6:6

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss89022795|allelePos=251|len=501|taxid=9606|alleles='A/T'|mol=Genomic
 CACACAGTTA TGTGTGAAAT TAGTCATGGA AGGAGGGTCG CATGGAAGGG CTGGATTCGA
 ATTACTGATT GCTTTGTAAA TATGGCTGAT CATCCTCACT CTGTTTGAGG GACTGTGTTA
 GGCTGGCATA GATTACAAAG AAGGCATAAT GCATCCTCCC TGCTCTCTTG AAGCTTGCAA
 TCAGTTGAGT AAGTAAACCA TGGAAAGAAG TGAGTACAAG ACACGACATT ATGGGCTCAG
 TACCAAAGAG
 W
 GGGGACACAC AGACACTAAG TACAACAGCA GCTCATAAAG AAAATCATTT ACATCTGGGA
 TGAGTCAAAA AACTTTTTGG AAAAAGAGGC CTTTTAACTA GTTTTGTAAA ATATACTGAA
 TGTCAATGAA AGCATTTGTA GGTAAAGAAC TATAGTGAGA ATAGGCTGAA GATCAAAAAA
 ACCGTAAAAT ATGTCAGAGG AAATGATGAA TAGAGCTAGC TGGGGCAGAG GTGGCTGGGG
 CTGTCATTAT

  Submitted Frequency for ss89022795 back to top
There is no frequency submission for ss89022795.


  dbSNP summary of Genotypes for ss89022795 back to top
No sufficient data to compute Hardy-weinberg probability for ss89022795.


  Submitted individual genotype for ss89022795 back to top
There is no individual genotype data for ss89022795.

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