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Submitted SNP(ss) Details: ss89558854           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0646702
RefSNP(rs#)rs1771178
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=A|Chr=chr13|Position=28099188|Strand=+|dbSNP=+|Score=231|Reads=11:11:11

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss89558854|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 CCTGGGGCCT CTGGCTGTGG GGTGATCATG TTCTTGTGCT TTTGTCCATC CTAAACAGTC
 AAAAATGTGT CCTGCCACAG GTGAGGCCTG GAGCTAGGAA GGGGTATGTG CTCAATGGTT
 TTATGTGTGC ACGGGGCTGG GGATGAGGCA GTGAAGGTGA AGGCTCATAG CTTTCTGCTC
 ACAATCCTCC AGGCCATGTG ACATCCACGC AGATGAGGGC ATTCAGCACC ATTTCCTTGC
 ATTGAATATT
 R
 AAGAATAGCT AATCATTCCC TAAGATCATT TTGAAGGTAA CAGCAATAAT AATGTCCTTG
 TGAATGTCAT GTTATGCCCT GCACTTCACA CACACTTTCT CATTCAGTGC TTCTCCACAC
 CGTAGGAGGA GGTATGAAAA GCCCCCTTTT ACAGATTAGG AGTGTCTGTG GGCAGTGTAT
 AAAAATGTAA GTGGAGACTT ACCCCTTACG TATATGCATG TTTGCTCTCT TTATAACATG
 AACATCATGC

  Submitted Frequency for ss89558854 back to top
There is no frequency submission for ss89558854.


  dbSNP summary of Genotypes for ss89558854 back to top
No sufficient data to compute Hardy-weinberg probability for ss89558854.


  Submitted individual genotype for ss89558854 back to top
There is no individual genotype data for ss89558854.

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