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Submitted SNP(ss) Details: ss90635729           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-1039355
RefSNP(rs#)rs281865545
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginG:Germline C:Both
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=C|Chr=chr17|Position=59804699|Strand=+|dbSNP=+|Score=132|Reads=6:6:6

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss90635729|allelePos=251|len=501|taxid=9606|alleles='G/C'|mol=Genomic
 AAGGAAGGAA GGAAGGAAGG AAGGAAGGAA GGAAGGAAGG AAGGAAGGAA GGAAGGGCCT
 GGCCTATTGG GAATATGTCT AGTGCTTACG TATTCAGGTA AGGAAAATGC CAGGCAGATG
 AATGAGAGGG TGATGGGTGG AGAGTTAAGT CCAGTGTCAC TATTCATTCA CAGCTGTTAT
 TCACGCCACT GTGTGCTATG CTCCATCTGC TTGCCTGTGC TCAGTTCCAA GGACTCACCT
 TCCACCAACA
 S
 CTGGTACTCT GCAGTGGTTT TCTCTTTGTT GTTCACAATC ACAGTACATT TATATGTCCC
 TGAGTCATAG ATCCGGACTT CAGGAATAAA ATAACTCTCT GTGCTCTTCA TGGAGGAGAT
 GTTGTAAAAC AGCACGTCAT CCTTATAGAA CAGCATCTGG TGCTGAGGCT TGACGTGAGA
 GGTGGTGCTG ACATCCGCGA AGCACTGCAG GGTCAGGTTC TTCCCATTTT GCACCGTCCA
 GTCCGGCAGG

  Submitted Frequency for ss90635729 back to top
There is no frequency submission for ss90635729.


  dbSNP summary of Genotypes for ss90635729 back to top
No sufficient data to compute Hardy-weinberg probability for ss90635729.


  Submitted individual genotype for ss90635729 back to top
There is no individual genotype data for ss90635729.

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