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Submitted SNP(ss) Details: ss92703408           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-1825201
RefSNP(rs#)rs1229984
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=T|Alt=C|Chr=chr4|Position=100458342|Strand=+|dbSNP=+|Score=159|Reads=7:7:11

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss92703408|allelePos=251|len=501|taxid=9606|alleles='T/C'|mol=Genomic
 GGAAACTCCT GAAGTCCTGG CTGCGCGGTG ACCTTGTGCA AGCACTTTCG TCTCTCATTG
 CCTTGGTTTC CTTATCCAGG CTGGGAAATC CTGGATGGTG AACCACACGT GTTCCCTGAG
 TGTGAATCCT GTACCTGGTT TGACTGTAGT CACCCCTTCT CCAACACTCT CCACGATGCC
 GGCTGCCTCA TGGCCTAAAA TCACAGGAAG GGGGGTCACC AGGTTGCCAC TAACCACGTG
 GTCATCTGTG
 Y
 GACAGATTCC TACAGCCACC ATCTACAGAA TAAAGAGAAG CTGTTCAGAT TCAGAAAAGA
 TTGTAACTAG ATGAATTTAA CATACCCAAA TTCCTGAAAT TGTGTTTCTA AAATGTATTT
 GAGGGTTTTG CTACTAATCC CTACTATTCC TAAATATGAA AGATTCAGTT TATCCCCAAG
 GTTATTCAGT CTAAAGCCCT TCTCTACCTT CCCTTCTTGA ATTAAACAAT TTAGAATAAT
 CTGTGAAATA

  Submitted Frequency for ss92703408 back to top
There is no frequency submission for ss92703408.


  dbSNP summary of Genotypes for ss92703408 back to top
No sufficient data to compute Hardy-weinberg probability for ss92703408.


  Submitted individual genotype for ss92703408 back to top
There is no individual genotype data for ss92703408.

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