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Submitted SNP(ss) Details: ss93646319           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-2285134
RefSNP(rs#)rs158
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=C|Alt=T|Chr=chr7|Position=24984487|Strand=+|dbSNP=+|Score=87|Reads=4:4:5

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss93646319|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 AGTTCTGCCA GGATAACCTT GGCAACACAG GTTAACCTGC TGGACCCTCA ATTTCCCATC
 TGGTTAAAAA TACCTAGCTA ACAGACTTCT GTAAGTTTAA TGCGGTAATG TACAAAAGTT
 CCTAGTATTG CTATTTGTTA ATTTTCCCAA CAGTAAAAAA AGGATAAAGA TGAAAATCAA
 AATCAGCTAT GAAATCCTCA TTCCTCATAT TTACAGAGAA GGTTTCATTT ATTCATTCTA
 TAAATGTTTA
 Y
 TGCAAACCTA CTGCGTGTTC TTGACACAGG GGATCAAGTG ATGAACAAGA CAGACAAGGT
 CTCTGCATTC CTGGTACTTA CATCCTAATG AGGGAAGGCA GATAACCCAA TAACCCAAAG
 AGACAATTTC AGAGAGAAAT TTAAGTGCTA TGAGCAACAG CAAACGGGTG ATGTGGCTTG
 GCTGGAGGGG ATGGTCATTT AGCTTGGATG CATAAGAACC TAGGCCTGCT TGACTGATCT
 CCTTTAGCCA

  Submitted Frequency for ss93646319 back to top
There is no frequency submission for ss93646319.


  dbSNP summary of Genotypes for ss93646319 back to top
No sufficient data to compute Hardy-weinberg probability for ss93646319.


  Submitted individual genotype for ss93646319 back to top
There is no individual genotype data for ss93646319.

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