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Submitted SNP(ss) Details: ss93876386           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-2457772
RefSNP(rs#)rs13277254
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=G|Alt=A|Chr=chr8|Position=42669139|Strand=+|dbSNP=+|Score=73|Reads=3:3:8

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss93876386|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 CCCTTGTTTA CAGTTGCTTA ATTAGTTCTG AGTCCCCTTA CATGTACTAC AGAACCAACC
 ACAATGCTCC TTTTTGTCCC CTTAGAGGTC ATGAAATAAT TTCTCAAAGT TTCTCCTTTT
 CTCATCATTA ATACCAAAAT GTCCTTTTCT TTAAAAAATC TTTTGTCTTT CCTGCCTTAA
 TAACCTTTTT AATGGTGTTG TTTTATATTC TAAAAAGTAA AAGTTATAAA AAGCTCAGTT
 GAAGGGTGTT
 R
 ACTCATACAT CAACTGGGTG ACCACAATGC TATCATGCAT GTTAGTGTGT GTGCTTGTGT
 GTGTGCACTG GAAGGAAGTA AAGCATTGAT GGTGATTGGA TTAGAATCAT GGACTGTAAG
 TGGTCTTGAA ATGTAGTATT AGGATTACAC TGCTTTCATG ATTACTAAAT GCCAATCAGA
 ACTTACATCT TCAATTGAAA GCACACCTGG CCGGGCTCGC ACAGTGGCTC ACACCTGTAA
 TCCCAGCTCT

  Submitted Frequency for ss93876386 back to top
There is no frequency submission for ss93876386.


  dbSNP summary of Genotypes for ss93876386 back to top
No sufficient data to compute Hardy-weinberg probability for ss93876386.


  Submitted individual genotype for ss93876386 back to top
There is no individual genotype data for ss93876386.