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Submitted SNP(ss) Details: ss97527218           
Submitter
HandleHUMANGENOME_JCVI
Submitter SNP ID1103649835411
RefSNP(rs#)rs9419554
Submitted Batch ID1.39
Submitted DateMar 29, 2008
Publication Cited17803354
First entry to dbSNPMar 29 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWGS-ASSEMBLY-ATAC-MAPPING
Ascertainment Samplesize2
PopulationJ. Craig Venter
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss97527218|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GAAGGTGGCC AGAAGGGGCT GTTCTTCCTG GCCAATCAGA ACTGATCACT GGTGTTTCTG
 GATTTGCCTC CCAAGATAAG ATAACCCCAG AGCAAAGAAC ATTATAAAGC TTTACAGTAA
 ATTATTCTAC AACTAGCTCA ATTTCTCATT ATTCATCACC AACTTGAAAC AAAATCCCAA
 CCTTGGGAAA ACACACATTC ACTCACATAC ACACACACAC ACACACACAC ACACACACCC
 CTGCTGGGAG
 R
 TGGGTGGCAT AGGGTTTTTC TTAAACAACT AAACAGTAGC AGGCCATTTG TGTAGATTGC
 TGATATATTG AAAATATCAT TCATCCAAGC TACGACTGAC AAAAAGAATA ATACATACCT
 GAGACATACT TGTACTATGT CCTAGGGCTC TTTACATATT CAGAGCTAAA AATAATACAT
 GGATGGAAAC TGTTGCTTAA GAATCTTTCC CAGTAATGTT AACATATTAA GCTACTAGGA
 AAGGAGAGAG

  Submitted Frequency for ss97527218 back to top
There is no frequency submission for ss97527218.


  dbSNP summary of Genotypes for ss97527218 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
HapMap-YRI112112G=0.91071427
A=0.08928572G/G=0.83928573
A/G=0.14285715
A/A=0.01785714
Pr(chiSq=0.828,df=1)
=0.371		Genotype
Freq.

  Submitted individual genotype for ss97527218 back to top
There is no individual genotype data for ss97527218.

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