NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss97613055           
Submitter
HandleHUMANGENOME_JCVI
Submitter SNP ID1103649835403
RefSNP(rs#)rs3020676
Submitted Batch ID1.37
Submitted DateMar 29, 2008
Publication Cited17803354
First entry to dbSNPMar 29 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGS-ASSEMBLY-ATAC-MAPPING
Ascertainment Samplesize2
PopulationJ. Craig Venter
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss97613055|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 CCTCTATGCA TTCTCTCTCC CTTTTGTCTT CTTAAATAAA GACCCATCCC AGGATTTTAC
 CCCAGGAAGG TGGACAAGAG TGGCAGCAAG GTATCCATGC AACAGATGGC ACTTCCTTAA
 CTCTGTTGCA CCCCTGTTCC AAGGTGCCTC CAAAGGACAG CACCACCAGA AGGGCAAAGC
 CCCCCATGCT GGAGTATGAG CCTGAGTCCC AGGATCCCTG GAGGAGCCAG AGGTTGGCTG
 GAGATAAGGC
 S
 CTCGGTGTCA GGAAGCTCTT GTGTGTGGGA AAGCTGCTGA CGCCCTATCA CCCCGTTTGC
 AGCTCCACTG ATACACCCAT AACCCGTAGG CAGGAAGCAG GGCCAACCTG GTTACACAAG
 ACTGATTAGT GATAAGGAGG AGAAAAAAAC CAGACATGCA CCCAGACTAC AGCATACACG
 CAGACTACAG CACGCGCACC CTTAAGGAAC CCACACACCC TCAACGGGCA GCAGGCACTA
 CTCTAACCCC

  Submitted Frequency for ss97613055 back to top
There is no frequency submission for ss97613055.


  dbSNP summary of Genotypes for ss97613055 back to top
No sufficient data to compute Hardy-weinberg probability for ss97613055.


  Submitted individual genotype for ss97613055 back to top
There is no individual genotype data for ss97613055.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement