NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss97913189           
Submitter
HandleHUMANGENOME_JCVI
Submitter SNP ID1103675000053
RefSNP(rs#)rs3115859
Submitted Batch ID1.3
Submitted DateMar 30, 2008
Publication Cited17803354
First entry to dbSNPMar 30 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWGS-ASSEMBLY-ATAC-MAPPING
Ascertainment Samplesize2
PopulationJ. Craig Venter
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss97913189|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 CAAGGCTCTC AGCACAACAA GACTCTATGA TTCTGTCTAT TGGAACAAAA AGCCAGTGAG
 GCAAGTGTAT CATCCTGTTG ACGAATTCAC AGCATTAACT CTGGGAGTTG GGGACAGTGT
 GTATTCTTCC TCCAGACACT CTCTGTTTCT CCTGGATGGA AAGGTTCTGC TACTTGTCCC
 GTGGTCAGGC CCAGCCAATG GAACGGAATG GAAGTGACTC TGCCCCTTAT TGGCAGAAAC
 TTTAAAAGCC
 R
 CACAACGTTC CTGCACCCTC CCCTCTGCCA TGAGCCTGGC AGTGCTCAGG ATGGGAAAAT
 TATCTCACCT GGGCCTGAGG ATACAGGAGC TACCCCCAGC CTGCAGTGGA AGAGAAGCAT
 GGACAAGTGA TTAAACTTTG TGTTTTCAAG CCACAGAGGT TTTTTGAAGT TGTTTGCTAC
 CATGCTTTGT CCCTACAAAC ACAGTCATGG AGAAGGCCAG TGGCAGAGCC TGAGCCGTTC
 GCGCATCTGT

  Submitted Frequency for ss97913189 back to top
There is no frequency submission for ss97913189.


  dbSNP summary of Genotypes for ss97913189 back to top
No sufficient data to compute Hardy-weinberg probability for ss97913189.


  Submitted individual genotype for ss97913189 back to top
There is no individual genotype data for ss97913189.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement