NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss97915056           
Submitter
HandleHUMANGENOME_JCVI
Submitter SNP ID1103675004688
RefSNP(rs#)rs2788089
Submitted Batch ID1.3
Submitted DateMar 30, 2008
Publication Cited17803354
First entry to dbSNPMar 30 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWGS-ASSEMBLY-ATAC-MAPPING
Ascertainment Samplesize2
PopulationJ. Craig Venter
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss97915056|allelePos=251|len=501|taxid=9606|alleles='G/A'|mol=Genomic
 TTGCCATGTT GGCCAGGTTG GTCTTGAACT CCTGACCTCA GGTAATCCAC CTGCCTCAGC
 CTCCCAAAGT GCTAGGATTA CAGGCATGAG CCACCATGAC TGGCCCTGCA AATATTTCTC
 TATATAGCAA CAAACTTAAA AAATTTTAAT CATTTATAGT AGCATCAAAA ATATCAAATG
 CCGAGTAATG AATCTTGTGA AAGGCAGGCA AAACCTCATC ACAGAAAAAT AGAGACCTTC
 AGAGACATTA
 R
 AGAAAACAGA AGTAAATCAA GGAATACCAT ATTTATAGAT TGAAAAAACC AATTAGGTCA
 AGTTGTCAAT CCTTTACAGA TTGATTTGTA GCGTTAATAC AATCCTAATC AAAATCCTGT
 ATGGTTTTCC ATGAAAACTT ACAGGCTAAT TTTTAAAGTT ATATGAAAAA TCAATGCATT
 TGGAGGAGTC AATTCATTCT TGAAGAACCA AAAGGGAGTT TGTACTCCAC AGACAGAAAT
 GAGTCTTACA

  Submitted Frequency for ss97915056 back to top
There is no frequency submission for ss97915056.


  dbSNP summary of Genotypes for ss97915056 back to top
No sufficient data to compute Hardy-weinberg probability for ss97915056.


  Submitted individual genotype for ss97915056 back to top
There is no individual genotype data for ss97915056.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement