NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss9897076           
Submitter
HandleBCM_SSAHASNP
Submitter SNP IDchr1.NT_004321.15_1041221
RefSNP(rs#)rs1104856
Submitted Batch IDBaylor-WGS-200306-1
Submitted DateJun 27, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJun 27 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBAYLOR-WGS-200306
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:55227555position:-770quality:29

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss9897076|allelePos=365|len=779|taxid=9606|alleles='G/A'|mol=Genomic
 CAGCCCAGCC CACTCCTGTC CCGCTTTAGC TGCTCCCGGC AGGCCTGGGT TCTGGTCTCT
 CCAGGCCACT GGCAACCTTC GTGTCCCTAA AGCTGGGGCG CCTTCTCACC AGAATGTGGC
 CCACCGGCAC ATGGGGTGCA GTTGCTTCCC CCTCCCCCGT GGAGGGACAT GACCTGCTCT
 AAGGCTCCAA TTCCTCCCTC cccagcacag aggtggcagg tccctctcca tcccttgaat
 ctgggtgact gtggcttgct ttggccaatg ggacagtggc agacacgtgg cagggcaggc
 tgaaatgaac tcatgcgcct gggcttgtct tgctgttgcc ctctgctgct gtcgcgagaa
 cgcc
 R
 tgcccaggct ggcgtgctgg gctcagacac agaaagcaaa gctgaggtgc cgcagctgcc
 tccaagacca ttctcaatca gtctccggct gcggacccca ggcacacgcg tgtgtgagcc
 cagtcagggc cagcagagcc gcctggccgc cctatggcca agtgcagatg caagagccag
 gcggctgcga tcagctgaac ccagccaggc cagcAGGGCA TCCTCTCTGA TGGGCTGTGC
 TCTGGGGCCT CCAGGACGCC ACCCTCGTCA GGCTTCCTCC CCAGTGCATT TCTTCCCCAG
 CGCCTGGTTT GCCTTCTTCC TCCCACTCTG CCTGGGGCTT CTCCTCTGTC TACACTTGCT
 CTTTAGAAGA GTGCTCCCAG TATCATGACC TTAAACCCAC TTCTTATACA CGCT

  Submitted Frequency for ss9897076 back to top
There is no frequency submission for ss9897076.


  dbSNP summary of Genotypes for ss9897076 back to top
No sufficient data to compute Hardy-weinberg probability for ss9897076.


  Submitted individual genotype for ss9897076 back to top
There is no individual genotype data for ss9897076.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement