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Submitted SNP(ss) Details: ss99307540           
Submitter
HandleSHGC
Submitter SNP ID2934
RefSNP(rs#)rs8192485
Submitted Batch IDP_chrnb2.2008.shgc
Submitted DateApr 17, 2008
Publication CitedN.D.
First entry to dbSNPApr 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSEQUENCE
Ascertainment Samplesize48
PopulationP24
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss99307540|allelePos=301|len=601|taxid=9606|alleles='A/G'|mol=Genomic
 GTCCTGCCTT TCCCCTGCCC AGGGGTGTGG GGTANGGATA CAGAGGAGCG GCTGGTGGAG
 CATCTCNTGG ATCCTTCCCG CTACAACAAG CTTATCCGCC CAGCCACCAA TGGCTCTGAG
 CTGGTGACAG TACAGCTTAT GGTGTCACTG GCCCAGCTCA TCAGTGTGGT GAGTAGAGGT
 CCCAGGCTCT CTGCCCAGCT ACTGAAATCA GCCCCGCCAA AATGTGTTAA TGCTTGTGTG
 CTTCCTCCCC TGGTGTTTCC AAGGCTTGGG GAGGTGTGAG AGGGACCCTG GGTGGTGGCA
 R
 TGACCCCACA GGCTTAGGGG CCTTCTCGGC AGCCTCTCTT CCTCCCTGCA GCATGAGCGG
 GAGCAGATCA TGACCACCAA TGTCTGGCTG ACCCAGGTAA GCGTAAGTGC TCTCTTCCAC
 CCACACCCCT GGCCTTCTCT CTCCTCCTTT TTCCCCATGT GCTTTTTTCT TTCTTAATCT
 CTCAAAACAG GCAGAAAGGT ATAGAGTTTG GAGTCCTAAA CAATTGGATT TGAATCTTGG
 CACTCACCAG CCTTGTGACT TTAAACATAT TAAACTCTCC AAGATTCATT TTCTCATTTG

  Submitted Frequency for ss99307540 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
P24
NORTH AMERICA
48G=0.98000002
A=0.02000000
P_chrnb2.2008.shgcSHGC


  dbSNP summary of Genotypes for ss99307540 back to top
No sufficient data to compute Hardy-weinberg probability for ss99307540.


  Submitted individual genotype for ss99307540 back to top
There is no individual genotype data for ss99307540.