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View SNP Submission Batch
Submitter Handle:GMI
Submitter Batch ID:2009NA10851SNP
Submitter Method ID:NA10851
Citation:not supplied
Population:NA10851
Comment:The SNPs of NA10851 were called by sequencing data with coverage 28.3x from Illumina Genome Analyzer IIx instrument. The filter condition used in calling of SNPs is same as that of paper "A highly annotated whole-genome sequence of a Korean individual" published in NATURE 2009.
Batch Total SubSNP(ss) Count:3680195


all, sort by
SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss283987235 GMI_NA10851_SNP_1 A/G 2 rs6682375 0 1 14907 NT_077402.3 4907
ss283987236 GMI_NA10851_SNP_2 A/G 2 rs6682385 0 1 14930 NT_077402.3 4930
ss283987237 GMI_NA10851_SNP_3 A/T 2 rs2758118 1 1 15274 NT_077402.3 5274
ss283987238 GMI_NA10851_SNP_4 G/T 2 rs78376469 0 1 16103 NT_077402.3 6103
ss283987239 GMI_NA10851_SNP_5 C/T 2 rs15642 0 1 16534 NT_077402.3 6534
ss283987240 GMI_NA10851_SNP_6 C/T 2 rs6661256 0 1 20467 NT_077402.3 10467
ss283987241 GMI_NA10851_SNP_7 A/G 2 rs2353763 1 1 20547 NT_077402.3 10547
ss283987242 GMI_NA10851_SNP_8 A/G 2 rs376349 1 1 26999 NT_077402.3 16999
ss283987243 GMI_NA10851_SNP_9 C/T 2 rs10399793 0 1 49298 NT_077402.3 39298
ss283987244 GMI_NA10851_SNP_10 A/C 2 rs3091274 0 1 55164 NT_077402.3 45164
ss283987245 GMI_NA10851_SNP_11 C/G 2 rs376250562 0 1 91340 NT_077402.3 81340
ss283987246 GMI_NA10851_SNP_12 G/T 2 rs370712517 0 1 91358 NT_077402.3 81358
ss283987247 GMI_NA10851_SNP_13 C/G 2 rs201615138 0 1 96271 NT_077402.3 86271
ss283987248 GMI_NA10851_SNP_14 A/G 2 rs1851939 0 1 98993 NT_077402.3 88993
ss283987249 GMI_NA10851_SNP_15 A/G 2 rs199601330 0 1 101686 NT_077402.3 91686
ss283987250 GMI_NA10851_SNP_16 C/T 2 rs4287120 0 1 104033 NT_077402.3 94033
ss283987251 GMI_NA10851_SNP_17 C/G 2 rs3872163 1 1 105279 NT_077402.3 95279
ss283987252 GMI_NA10851_SNP_18 C/T 2 rs74747225 0 1 108310 NT_077402.3 98310
ss283987253 GMI_NA10851_SNP_19 G/T 2 rs10047118 0 1 261424 NT_187170.1 3758
ss283987254 GMI_NA10851_SNP_20 A/T 2 rs10047119 0 1 261454 NT_187170.1 3788
ss283987255 GMI_NA10851_SNP_21 A/C 2 rs10047174 0 1 261463 NT_187170.1 3797
ss283987256 GMI_NA10851_SNP_22 C/T 2 rs10047121 0 1 261495 NT_187170.1 3829
ss283987257 GMI_NA10851_SNP_23 A/G 2 rs10047230 0 1 261753 NT_187170.1 4087
ss283987258 GMI_NA10851_SNP_24 A/T 2 rs67872322 1 1 262750 NT_187170.1 5084
ss283987259 GMI_NA10851_SNP_25 C/T 2 rs201125094 0 1 264715 NT_187170.1 7049
ss283987260 GMI_NA10851_SNP_26 A/C 2 rs6422503 0 1 266225 NT_187170.1 8559
ss283987261 GMI_NA10851_SNP_27 A/G 2 rs79665216 0 1 268012 NT_187170.1 10346
ss283987262 GMI_NA10851_SNP_28 C/G 2 rs143434963 0 1 270684 NT_187170.1 13018
ss283987263 GMI_NA10851_SNP_29 C/G 2 rs79571896 0 1 281912 NT_187170.1 24246
ss283987264 GMI_NA10851_SNP_30 C/T 2 rs373263513 0 1 370169 NT_077912.2 22201
30 of 3680195 subsnp's starting at ss283987235. ss# starting at ss