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dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
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View SNP Submission Batch
Submitter Handle:1000GENOMES
Submitter Batch ID:phase_1_vqsr_v2b_sites_june_2011
Submitter Method ID:LOW_COVERAGE
Citation:not supplied
Comment:1000 Genomes Phase 1 data release from 20101123 data freeze
Batch Total SubSNP(ss) Count:47398719


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss218190318 pilot_1_YRI_1_chr1_45027 A/C 118 rs3091274 0 1 55164 NT_077402.3 45164
ss218190319 pilot_1_YRI_2_chr1_45162 C/T 118 rs10399749 0 1 55299 NT_077402.3 45299
ss218190320 pilot_1_YRI_3_chr1_48677 A/G 118 rs114420996 0 1 58814 NT_077402.3 48814
ss218190321 pilot_1_YRI_4_chr1_51325 A/T 118 rs56992750 0 1 61462 NT_077402.3 51462
ss218190323 pilot_1_YRI_6_chr1_53534 A/G 118 rs80011619 0 1 63671 NT_077402.3 53671
ss218190324 pilot_1_YRI_7_chr1_57044 A/G 118 rs28503582 0 1 67181 NT_077402.3 57181
ss218190325 pilot_1_YRI_8_chr1_76166 G/T 118 rs2949417 0 1 86303 NT_077402.3 76303
ss218190326 pilot_1_YRI_9_chr1_76194 A/G 118 rs115209712 0 1 86331 NT_077402.3 76331
ss218190327 pilot_1_YRI_10_chr1_78201 A/G 118 rs55700207 0 1 88338 NT_077402.3 78338
ss218190329 pilot_1_YRI_12_chr1_223336 C/G 118 rs112455420 0 1 263722 NT_187170.1 6056
ss218190331 pilot_1_YRI_14_chr1_523033 G/T 118 rs114617477 0 1 597790 NT_032977.10 11802
ss218190335 pilot_1_YRI_18_chr1_590341 A/G 118 rs114979547 0 1 665098 NT_032977.10 79110
ss218190337 pilot_1_YRI_20_chr1_608326 A/G 118 rs4108074 0 1 683083 NT_032977.10 97095
ss218190338 pilot_1_YRI_21_chr1_658209 A/G 118 rs115048193 0 1 732966 NT_032977.10 146978
ss218190340 pilot_1_YRI_23_chr1_703882 A/G 118 rs114983708 0 1 778639 NT_032977.10 192651
ss218190341 pilot_1_YRI_24_chr1_706104 C/T 118 rs116632831 0 1 780861 NT_032977.10 194873
ss218190342 pilot_1_YRI_25_chr1_709736 G/T 118 rs114149602 0 1 784493 NT_032977.10 198505
ss218190343 pilot_1_YRI_26_chr1_710982 C/T 118 rs115019173 0 1 785739 NT_032977.10 199751
ss218190345 pilot_1_YRI_28_chr1_712843 C/T 118 rs114222710 0 1 787600 NT_032977.10 201612
ss218190346 pilot_1_YRI_29_chr1_713682 A/T 118 rs11804171 0 1 788439 NT_032977.10 202451
ss218190347 pilot_1_YRI_30_chr1_713754 C/G 118 rs2977670 1 1 788511 NT_032977.10 202523
ss218190350 pilot_1_YRI_33_chr1_719495 C/T 118 rs116720794 0 1 794252 NT_032977.10 208264
ss218190351 pilot_1_YRI_34_chr1_721983 C/T 118 rs114572157 0 1 796740 NT_032977.10 210752
ss218190353 pilot_1_YRI_36_chr1_726146 A/T 118 rs115403623 0 1 800903 NT_032977.10 214915
ss218190354 pilot_1_YRI_37_chr1_726152 A/T 118 rs79010578 0 1 800909 NT_032977.10 214921
ss218190355 pilot_1_YRI_38_chr1_726946 A/G 118 rs114937396 0 1 801703 NT_032977.10 215715
ss218190356 pilot_1_YRI_39_chr1_730279 A/G 118 rs11488376 0 1 805036 NT_032977.10 219048
ss218190357 pilot_1_YRI_40_chr1_730720 A/G 118 rs12082473 0 1 805477 NT_032977.10 219489
ss