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View SNP Submission Batch
Submitter Handle:
1000GENOMES
Submitter Batch ID:
phase_1_vqsr_v2b_sites_june_2011
Submitter Method ID:
LOW_COVERAGE
Citation:
not supplied
Comment:
1000 Genomes Phase 1 data release from 20101123 data freeze
Batch Total SubSNP(ss) Count:
47398719
SubSNP(ss)
Submitter
SNP_ID
SNP
Allele
Samplesize
RefSNP(rs)
ss2rs
Orien
Chr
ChrPos
Contig
Accession
Contig
Pos
ss218190318
pilot_1_YRI_1_chr1_45027
A/C
118
rs3091274
0
1
55164
NT_077402.3
45164
ss218190319
pilot_1_YRI_2_chr1_45162
C/T
118
rs10399749
0
1
55299
NT_077402.3
45299
ss218190320
pilot_1_YRI_3_chr1_48677
A/G
118
rs114420996
0
1
58814
NT_077402.3
48814
ss218190321
pilot_1_YRI_4_chr1_51325
A/T
118
rs56992750
0
1
61462
NT_077402.3
51462
ss218190323
pilot_1_YRI_6_chr1_53534
A/G
118
rs80011619
0
1
63671
NT_077402.3
53671
ss218190324
pilot_1_YRI_7_chr1_57044
A/G
118
rs28503582
0
1
67181
NT_077402.3
57181
ss218190325
pilot_1_YRI_8_chr1_76166
G/T
118
rs2949417
0
1
86303
NT_077402.3
76303
ss218190326
pilot_1_YRI_9_chr1_76194
A/G
118
rs115209712
0
1
86331
NT_077402.3
76331
ss218190327
pilot_1_YRI_10_chr1_78201
A/G
118
rs55700207
0
1
88338
NT_077402.3
78338
ss218190329
pilot_1_YRI_12_chr1_223336
C/G
118
rs112455420
0
1
263722
NT_187170.1
6056
ss218190331
pilot_1_YRI_14_chr1_523033
G/T
118
rs114617477
0
1
597790
NT_032977.10
11802
ss218190335
pilot_1_YRI_18_chr1_590341
A/G
118
rs114979547
0
1
665098
NT_032977.10
79110
ss218190337
pilot_1_YRI_20_chr1_608326
A/G
118
rs4108074
0
1
683083
NT_032977.10
97095
ss218190338
pilot_1_YRI_21_chr1_658209
A/G
118
rs115048193
0
1
732966
NT_032977.10
146978
ss218190340