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dbSNP

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View SNP Submission Batch
Submitter Handle:TISHKOFF
Submitter Batch ID:Lachance2012Cell_snp
Submitter Method ID:COMPLETE GENOMICS
Citation:Evolutionary History and Adaptation from High-Coverage Whole-Genome Sequences of Diverse African Hunter-Gatherers
Comment:10 Pygmy, 10 Hadza, and 10 Sandawe chromosomes were sequenced to detect varation
Batch Total SubSNP(ss) Count:12169317


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss553708518 snp_chr1_41981 A/G 30 rs806721 1 1 41981 NT_077402.3 31981
ss553710060 snp_chr1_54353 A/C 30 rs140052487 0 1 54353 NT_077402.3 44353
ss553710064 snp_chr1_54479 A/T 30 rs369584673 0 1 54479 NT_077402.3 44479
ss553710068 snp_chr1_57033 C/T 30 rs2691311 0 1 57033 NT_077402.3 47033
ss553710070 snp_chr1_57064 A/G 30 rs369801568 0 1 57064 NT_077402.3 47064
ss553710072 snp_chr1_58211 A/G 30 rs2691335 0 1 58211 NT_077402.3 48211
ss553710073 snp_chr1_59040 C/T 30 rs62637815 0 1 59040 NT_077402.3 49040
ss553710074 snp_chr1_62426 A/G 30 rs375877701 0 1 62426 NT_077402.3 52426
ss553710075 snp_chr1_63332 A/G 30 rs376486292 0 1 63332 NT_077402.3 53332
ss553710076 snp_chr1_68306 C/T 30 rs3020702 1 1 68306 NT_077402.3 58306
ss553710077 snp_chr1_68316 C/T 30 rs2907081 0 1 68316 NT_077402.3 58316
ss553710078 snp_chr1_69552 C/G 30 rs2531266 0 1 69552 NT_077402.3 59552
ss553710079 snp_chr1_69569 C/T 30 rs2531267 0 1 69569 NT_077402.3 59569
ss553710080 snp_chr1_79137 A/T 30 rs143777184 0 1 79137 NT_077402.3 69137
ss553710081 snp_chr1_86788 A/G 30 rs368787506 0 1 86788 NT_077402.3 76788
ss553710083 snp_chr1_86996 A/G 30 rs376509721 0 1 86996 NT_077402.3 76996
ss553710086 snp_chr1_87360 C/T 30 rs180907504 0 1 87360 NT_077402.3 77360
ss553710087 snp_chr1_564598 A/G 30 rs6594028 0 1 629218 NT_032977.10 43230
ss553710088 snp_chr1_564654 A/G 30 rs147404388 0 1 629274 NT_032977.10 43286
ss553710089 snp_chr1_564862 C/T 30 rs1988726 0 1 629482 NT_032977.10 43494
ss553710090 snp_chr1_564868 C/T 30 rs1832728 1 1 629488 NT_032977.10 43500
ss553710091 snp_chr1_564938 A/G 30 rs374020481 0 1 629558 NT_032977.10 43570
ss553710093 snp_chr1_565002 C/T 30 rs370421824 0 1 629622 NT_032977.10 43634
ss553710096 snp_chr1_565006 C/T 30 rs1856864 1 1 629626 NT_032977.10 43638
ss553710101 snp_chr1_565041 A/G 30 rs368517397 0 1 629661 NT_032977.10 43673
ss553710103 snp_chr1_565286 C/T 30 rs1578391 1 1 629906 NT_032977.10 43918
ss553710107 snp_chr1_565406 C/T 30 rs6594029 0 1 630026 NT_032977.10 44038
ss553710109 snp_chr1_565454 C/T 30 rs7349151 0 1 630074 NT_032977.10 44086
ss553710110 snp_chr1_565464 C/T 30 rs6594030 0 1 630084 NT_032977.10 44096
ss553710113 snp_chr1_565541 A/G 30 rs6594031 0 1 630161 NT_032977.10 44173
30 of 12169317 subsnp's starting at ss553708518. ss# starting at ss