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View SNP Submission Batch
Submitter Handle:SSMP
Submitter Batch ID:2012_July snp
Submitter Method ID:ILLUMINAHISEQ2000-SEQUENCING
Citation:not supplied
Population:SSM
Comment:Illumina Hiseq 2000 whole genome sequencing on 96 South East Asian Malays (Singapore) with 30X coverage, 2x100 paired-end reads and insert sizes between 300 and 400
Batch Total SubSNP(ss) Count:13989798


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss647514732 1_10469 C/G 192 rs370233998 0 1 10469 NT_077402.3 469
ss647514733 1_10583 A/G 192 rs58108140 0 1 10583 NT_077402.3 583
ss647514734 1_14653 C/T 192 rs62635297 0 1 14653 NT_077402.3 4653
ss647514735 1_14673 C/G 192 rs4690 0 1 14673 NT_077402.3 4673
ss647514736 1_14699 C/G 192 rs62635298 0 1 14699 NT_077402.3 4699
ss647514737 1_14717 A/G 192 rs377122907 0 1 14717 NT_077402.3 4717
ss647514738 1_14907 A/G 192 rs6682375 0 1 14907 NT_077402.3 4907
ss647514739 1_14930 A/G 192 rs6682385 0 1 14930 NT_077402.3 4930
ss647514740 1_14933 A/G 192 rs199856693 0 1 14933 NT_077402.3 4933
ss647514741 1_14976 A/G 192 rs71252251 1 1 14976 NT_077402.3 4976
ss647514742 1_15118 A/G 192 rs11580262 0 1 15118 NT_077402.3 5118
ss647514743 1_15208 A/G 192 rs368345873 0 1 15208 NT_077402.3 5208
ss647514744 1_15211 G/T 192 rs3982632 1 1 15211 NT_077402.3 5211
ss647514745 1_15774 A/G 192 rs374029747 0 1 15774 NT_077402.3 5774
ss647514746 1_15817 G/T 192 rs2691316 1 1 15817 NT_077402.3 5817
ss647514747 1_15820 G/T 192 rs2691315 1 1 15820 NT_077402.3 5820
ss647514748 1_15922 A/G 192 rs375964566 0 1 15922 NT_077402.3 5922
ss647514749 1_15956 A/G 192 rs112448831 0 1 15956 NT_077402.3 5956
ss647514750 1_16068 C/T 192 rs372319358 0 1 16068 NT_077402.3 6068
ss647514751 1_16103 G/T 192 rs78376469 0 1 16103 NT_077402.3 6103
ss647514752 1_16378 C/T 192 rs148220436 0 1 16378 NT_077402.3 6378
ss647514753 1_16487 C/T 192 rs373516660 0 1 16487 NT_077402.3 6487
ss647514754 1_17222 A/G 192 rs200978805 0 1 17222 NT_077402.3 7222
ss647514755 1_17365 C/G 192 rs369606208 0 1 17365 NT_077402.3 7365
ss647514756 1_17407 A/G 192 rs372841554 0 1 17407 NT_077402.3 7407
ss647514757 1_17452 C/T 192 rs200503540 0 1 17452 NT_077402.3 7452
ss647514758 1_17538 A/C 192 rs71260068 0 1 17538 NT_077402.3 7538
ss647514759 1_17556 C/T 192 rs374545136 0 1 17556 NT_077402.3 7556
ss647514760 1_17594 C/T 192 rs377698370 0 1 17594 NT_077402.3 7594
ss647514761 1_17614 A/G 192 rs201057270 0 1 17614 NT_077402.3 7614
30 of 13989798 subsnp's starting at ss647514732. ss# starting at ss