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dbSNP

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View SNP Submission Batch
Submitter Handle:SSMP
Submitter Batch ID:2012_July indels
Submitter Method ID:ILLUMINAHISEQ2000-SEQUENCING
Citation:not supplied
Population:SSM
Comment:Illumina Hiseq 2000 whole genome sequencing on 96 South East Asian Malays (Singapore) with 30X coverage, 2x100 paired-end reads and insert sizes between 300 and 400
Batch Total SubSNP(ss) Count:1486761


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss663103043 indel_1_10001236 -/TTCG 192 rs137978085 0 1 9941178 NT_032977.10 9355190
ss663103032 indel_1_100000098 -/TAAAG 192 rs757679384 0 1 99534542 NT_032977.10 98948554
ss663103033 indel_1_100000990 -/TC 192 rs146963890 0 1 99535433 NT_032977.10 98949445
ss663103034 indel_1_100001672 -/T 192 rs571399445 0 1 99536115 NT_032977.10 98950127
ss663103035 indel_1_100002709 -/T 192 rs758503035 0 1 99537152 NT_032977.10 98951164
ss663103036 indel_1_100002753 -/A 192 rs771148023 0 1 99537197 NT_032977.10 98951209
ss663103037 indel_1_100004210 -/TTTTT 192 rs10680837 0 1 99538653 NT_032977.10 98952665
ss663103038 indel_1_100004464 -/A 192 rs11325272 0 1 99538908 NT_032977.10 98952920
ss663103039 indel_1_100004918 -/TTAT 192 rs77183870 0 1 99539362 NT_032977.10 98953374
ss663103040 indel_1_100006544 -/T 192 rs748016786 0 1 99540987 NT_032977.10 98954999
ss663103041 indel_1_100008703 -/T 192 rs372516637 0 1 99543146 NT_032977.10 98957158
ss663103042 indel_1_100009144 -/AA 192 rs773157146 0 1 99543588 NT_032977.10 98957600
ss663103044 indel_1_100013849 -/TTG 192 rs200344241 0 1 99548293 NT_032977.10 98962305
ss663103045 indel_1_100015193 -/T 192 rs35907285 0 1 99549637 NT_032977.10 98963649
ss663103046 indel_1_100017409 -/A 192 rs370372623 0 1 99551852 NT_032977.10 98965864
ss663103047 indel_1_100020524 -/A 192 rs557264932 0 1 99554967 NT_032977.10 98968979
ss663103048 indel_1_100024455 -/TCTC 192 rs148268540 0 1 99558899 NT_032977.10 98972911
ss663103049 indel_1_100026916 -/AAAAC 192 rs560855484 0 1 99561359 NT_032977.10 98975371
ss663103050 indel_1_100031152 -/TA 192 rs71677319 0 1 99565596 NT_032977.10 98979608
ss663103051 indel_1_100032861 -/A 192 rs376868124 0 1 99567305 NT_032977.10 98981317
ss663103052 indel_1_100033050 -/AT 192 rs201640197 0 1 99567493 NT_032977.10 98981505
ss663103053 indel_1_100033313 -/A 192 rs35046143 0 1 99567757 NT_032977.10 98981769
ss663103054 indel_1_100033364 -/G 192 rs199795361 0 1 99567808 NT_032977.10 98981820
ss663103055 indel_1_100033518 -/A 192 rs150891802 0 1 99567961 NT_032977.10 98981973
ss663103056 indel_1_100033755 -/A 192 rs772298238 0 1 99568198 NT_032977.10 98982210
ss663103057 indel_1_100034304 -/TA 192 rs146068796 0 1 99568747 NT_032977.10 98982759
ss663103058 indel_1_100035268 -/AAACA 192 rs141018912 0 1 99569712 NT_032977.10 98983724
ss663103059 indel_1_100037871 -/CC 192 rs71732057 0 1 99572314 NT_032977.10 98986326
ss663103060 indel_1_100042878 -/CTCA 192 rs749222012 0 1 99577322 NT_032977.10 98991334
ss663103061 indel_1_100043649 -/A 192 rs761800245 0 1 99578093 NT_032977.10 98992105
30 of 1486761 subsnp's starting at ss663103043. ss# starting at ss