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View SNP Submission Batch
Submitter Handle:
GENOMED
Submitter Batch ID:
CLG_Seq18
Submitter Method ID:
SOLID_WHOLE_GENOME
Citation:
Whole-genome sequencing reveals large diversity in the Amerindian components of modern Chileans - ChileGenomico Project
Comment:
not supplied
Batch Total SubSNP(ss) Count:
4791130
SubSNP(ss)
Submitter
SNP_ID
SNP
Allele
Samplesize
RefSNP(rs)
ss2rs
Orien
Chr
ChrPos
Contig
Accession
Contig
Pos
ss1966667259
rs6682385
A/G
36
rs6682385
0
1
14930
NT_077402.3
4930
ss1966667260
rs11489794
C/G
36
rs11489794
0
1
16257
NT_077402.3
6257
ss1966667261
rs62636498
C/T
36
rs2747966
1
1
16298
NT_077402.3
6298
ss1966667262
rs148220436
C/T
36
rs148220436
0
1
16378
NT_077402.3
6378
ss1966667263
rs143346096
A/G
36
rs77331792
0
1
20144
NT_077402.3
10144
ss1966667264
rs6682921
A/G
36
rs6682921
0
1
20245
NT_077402.3
10245
ss1966667265
rs3091274
A/C
36
rs3091274
0
1
55164
NT_077402.3
45164
ss1966658527
rs1800861
G/T
36
rs1800861
1
10
43118395
NT_030059.14
1424874
ss1966658528
rs1800863
C/G
36
rs1800863
0
10
43120185
NT_030059.14
1426664
ss1966658540
rs227075
C/T
36
rs227075
0
11
108347469
NT_033899.9
20344573
ss1966658541
rs664143
A/G
36
rs664143
1
11
108354934
NT_033899.9
20352038
ss1966658543
rs2491231
A/G
36
rs2491231
0
13
28036046
NT_024524.15
9627940
ss1966658560
rs1625895
C/T
36
rs1625895
1
17
7674797
NT_010718.17
7185810
ss1966658571
rs1042522
C/G
36
rs1042522
1
17
7676154
NT_010718.17
7187167
ss1966658580
rs4900
C/T
36
rs4900
0
19
3119241
NT_011295.12
3059241
ss1966658583
rs5751738
C/G
36
rs5751738
0
22
23803488
NT_011520.13
5093924
ss1966658477
rs2699895
A/C
36
rs2699895
0
3
179203851
NT_005612.17
85498277
ss1966658484
rs7688609
A/G
36
rs7688609
0
4
1806167
NT_006051.19
1796167
ss1966658487
rs1873778
A/G
36
rs1873778
1
4
54274888
NT_022853.16
2480937
ss1966658488
rs2228230
C/T
36
rs2228230
0
4
54285873
NT_022853.16
2491922
ss1966658490
rs3822214
A/C
36
rs3822214
0
4
54727298
NT_022853.16
2933347
ss1966658492
rs62304360
C/T
36
rs62304360
0
4
54733263
NT_022853.16
2939312
ss1966658493
rs1008658
C/T
36
rs1008658
1
4
54733270
NT_022853.16
2939319
ss1966658494
rs3733542
C/G
36
rs3733542
0
4
54736599
NT_022853.16
2942648
ss1966658495
rs4421048
A/G
36
rs4421048
0
4
55079914
NT_022853.16
3285963
ss1966658498
rs397772062
-/G
36
rs3214870
1
4
55096378
NT_022853.16
3302427
ss1966658499
rs1870377
A/T
36
rs1870377
0
4
55106807
NT_022853.16
3312856
ss1966658506
rs41115
A/G
36
rs41115
1
5
112840073
NT_034772.7
62730266
ss1966658518
rs2735842
A/G
36
rs2735842
0
7
129206628
NT_007933.16
66699849
ss1966658523
rs1328529
A/G
36
rs1328529
0
9
77794429
NT_008470.20
9573877
30 of 4791130 subsnp's starting at ss1966667259.
10
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ss# starting at ss