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View SNP Submission Batch
Submitter Handle:MCHAISSO
Submitter Batch ID:HG00733
Submitter Method ID:UNIFIEDCALLSET
Citation:Multi-platform discovery of haplotype-resolved structural variation in human genomes
Population:CHS-PUR-YRI
Comment:not supplied
Batch Total SubSNP(ss) Count:896431
Method Extra Detail:THIS IS UNIFIED CALLSET BETWEEN READ-BASED ILLUMINA CALLS AND ASSEMBLY BASED PACBIO CALLS


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss2137543780 HG007331 -/TGT 46 rs756427959 0 1 14398 NT_077402.3 4398
ss3064385946 HG007332 -/TGG 46 rs757557694 0 1 28590 NT_077402.3 18590
ss3064385947 HG007333 -/A 46 rs1190929441 0 1 53708 NT_077402.3 43708
ss3064385948 HG007334 -/CTTTT 46 rs1416682533 0 1 94809 NT_077402.3 84809
ss3064385949 HG007335 -/TTTATTTA 46 rs1406394177 0 1 99000 NT_077402.3 89000
ss3064385950 HG007336 -/C 46 rs1408870287 0 1 107288 NT_077402.3 97288
ss3064385951 HG007337 -/A 46 rs780819404 0 1 124497 NT_077402.3 114497
ss3064385952 HG007338 -/AAC 46 rs756031404 0 1 125862 NT_077402.3 115862
ss3064385953 HG007339 -/ATG 46 rs377161483 0 1 129011 NT_077402.3 119011
ss3064385954 HG0073310 -/CCCTAA 46 rs1467516388 0 1 180959 NT_077402.3 170959
ss3064385955 HG0073311 -/CC 46 rs1379400053 0 1 189393 NT_077402.3 179393
ss3064385956 HG0073312 -/AG 46 rs1447531543 0 1 190622 NT_077402.3 180622
ss3064385957 HG0073313 -/T 46 rs1329235875 0 1 198845 NT_077402.3 188845
ss3064385958 HG0073314 -/AC 46 rs1177828660 0 1 202326 NT_077402.3 192326
ss3064385959 HG0073315 -/AGG 46 rs202029170 0 1 278166 NT_187170.1 20500
ss3064385960 HG0073316 -/A 46 rs1457954663 0 1 278241 NT_187170.1 20575
ss3064385961 HG0073317 -/T 46 rs200079338 0 1 279524 NT_187170.1 21858
ss3064385962 HG0073318 -/C 46 rs72502741 0 1 281877 NT_187170.1 24211
ss3064385963 HG0073319 -/A 46 rs1450980268 0 1 282616 NT_187170.1 24950
ss3064385964 HG0073320 -/TC 46 rs199745078 0 1 286172 NT_187170.1 28506
ss3064385965 HG0073321 -/G 46 rs1290806223 0 1 296780 NT_187170.1 39114
ss3064385966 HG0073322 -/ATA 46 rs756558238 0 1 297605 NT_187170.1 39939
ss3064385967 HG0073323 -/T 46 rs1435706844 0 1 297809 NT_187170.1 40143
ss3064385968 HG0073324 -/AG 46 rs1350044098 0 1 396652 NT_077912.2 48684
ss3064385969 HG0073325 -/T 46 rs1229153142 0 1 414086 NT_077912.2 66118
ss3064385970 HG0073326 -/GAAA 46 rs1270088495 0 1 417964 NT_077912.2 69996
ss3064385971 HG0073327 -/CCA 46 rs1333397237 0 1 464419 NT_077912.2 116451
ss3064385972 HG0073328 -/AAC 46 rs1221507069 0 1 506033 NT_077912.2 158065
ss3064385973 HG0073329 -/AC 46 rs1293197580 0 1 517599 NT_077912.2 169631
ss3064385974 HG0073330 -/AAGT 46 rs1489673106 0 1 524587 NT_077912.2 176619
30 of 896431 subsnp's starting at ss2137543780. ss# starting at ss

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