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View SNP Submission Batch
Submitter Handle:MCHAISSO
Submitter Batch ID:NA19240
Submitter Method ID:UNIFIEDCALLSET
Citation:Multi-platform discovery of haplotype-resolved structural variation in human genomes
Population:CHS-PUR-YRI
Comment:not supplied
Batch Total SubSNP(ss) Count:1033467
Method Extra Detail:THIS IS UNIFIED CALLSET BETWEEN READ-BASED ILLUMINA CALLS AND ASSEMBLY BASED PACBIO CALLS


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss2137543781 NA192401 -/ACCCT 46 rs1462685959 0 1 10110 NT_077402.3 110
ss3065282376 NA192402 -/TGG 46 rs757557694 0 1 28590 NT_077402.3 18590
ss3065282377 NA192403 -/C 46 rs780660371 0 1 29279 NT_077402.3 19279
ss3065282378 NA192404 -/C 46 rs1326485052 0 1 39487 NT_077402.3 29487
ss3065282379 NA192405 -/A 46 rs200430748 0 1 47190 NT_077402.3 37190
ss3065282380 NA192406 -/TG 46 rs1453393205 0 1 50481 NT_077402.3 40481
ss3065282381 NA192407 -/AT 46 rs199502715 0 1 53235 NT_077402.3 43235
ss3065282382 NA192408 -/A 46 rs1190929441 0 1 53708 NT_077402.3 43708
ss3065282383 NA192409 -/TTTC 46 rs773293602 0 1 54713 NT_077402.3 44713
ss3065282384 NA1924010 -/CTTC 46 rs544370662 0 1 62297 NT_077402.3 52297
ss3065282385 NA1924011 -/TATATA 46 rs201684885 0 1 66161 NT_077402.3 56161
ss3065282386 NA1924012 -/ATTATATTATATAATATATAATATAAATATAATATAA 46 rs1487342636 0 1 66239 NT_077402.3 56239
ss3065282387 NA1924013 -/TT 46 rs560481224 0 1 66436 NT_077402.3 56436
ss3065282388 NA1924014 -/TATATATTATATAAATA 46 rs1317121599 0 1 66598 NT_077402.3 56598
ss3065282389 NA1924015 -/AA 46 rs550749506 0 1 82134 NT_077402.3 72134
ss3065282390 NA1924016 -/AA 46 rs550749506 0 1 82134 NT_077402.3 72134
ss3065282391 NA1924017 -/AGAAAGAA 46 rs1394597135 0 1 83829 NT_077402.3 73829
ss3065282392 NA1924018 -/AGAG 46 rs1194145338 0 1 83912 NT_077402.3 73912
ss3065282393 NA1924019 -/GAAA 46 rs368742622 0 1 83945 NT_077402.3 73945
ss3065282394 NA1924020 -/AAAGAAAGAAAGAAAGAAAA 46 rs1336586596 0 1 83994 NT_077402.3 73994
ss3065282395 NA1924021 -/AAAGAAAGAAAGAAAGAAAA 46 rs1336586596 0 1 83994 NT_077402.3 73994
ss3065282396 NA1924022 -/AAAA 46 rs1341255223 0 1 84002 NT_077402.3 74002
ss3065282397 NA1924023 -/AAAA 46 rs1341255223 0 1 84002 NT_077402.3 74002
ss3065282398 NA1924024 -/AAAGA 46 rs1157258639 0 1 84018 NT_077402.3 74018
ss3065282399 NA1924025 -/AAGAAAGAAAG 46 rs1362537270 0 1 84020 NT_077402.3 74020
ss3065282400 NA1924026 -/AAG 46 rs1462322794 0 1 84028 NT_077402.3 74028
ss3065282401 NA1924027 -/AAAGA 46 rs372284318 0 1 84030 NT_077402.3 74030
ss3065282402 NA1924028 -/AAAGA 46 rs372284318 0 1 84030 NT_077402.3 74030
ss3065282403 NA1924029 -/T 46 rs375085441 0 1 91551 NT_077402.3 81551
ss3065282404 NA1924030 -/AA 46 rs1280779286 0 1 92664 NT_077402.3 82664
30 of 1033467 subsnp's starting at ss2137543781. ss# starting at ss