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View SNP Submission Batch
Submitter Handle:WI_SSAHASNP
Submitter Batch ID:WIBR_S227_SNPS_200403
Submitter Method ID:WIBR_S227_SNPS_200310
Citation:SNPs detected by comparing chromosome 18 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:2657


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss23038642 WIBR_S227_SNPS_200403.chr1.NT_004511.16_844346 G/T 2 rs9943209 0 1 30433098 NT_032977.10 29847110
ss23038647 WIBR_S227_SNPS_200403.chr1.NT_032977.6_18140536 A/G 2 rs9943288 0 1 56111793 NT_032977.10 55525805
ss23038637 WIBR_S227_SNPS_200403.chr1.NT_004668.16_2495182 A/G 2 rs9661138 0 1 164020473 NT_004487.20 20835886
ss23038638 WIBR_S227_SNPS_200403.chr1.NT_004668.16_9289902 G/T 2 rs9943184 0 1 170815289 NT_004487.20 27630702
ss23038639 WIBR_S227_SNPS_200403.chr1.NT_004487.16_12023599 C/T 2 rs9943067 0 1 183005967 NT_004487.20 39821380
ss23038635 WIBR_S227_SNPS_200403.chr1.NT_004487.16_12023699 A/G 2 rs9943069 0 1 183006067 NT_004487.20 39821480
ss23038645 WIBR_S227_SNPS_200403.chr1.NT_004836.15_9343068 C/T 2 rs9943260 0 1 244516402 NT_167186.2 20907467
ss23038646 WIBR_S227_SNPS_200403.chr1.NT_004836.15_9343175 G/T 2 rs9943261 0 1 244516509 NT_167186.2 20907574
ss23038660 WIBR_S227_SNPS_200403.chr10.NT_077567.3_3301958 C/T 2 rs9943392 0 10 3319766 NT_008705.17 3309766
ss23038659 WIBR_S227_SNPS_200403.chr10.NT_077569.2_9386169 C/T 2 rs9943386 0 10 14981274 NT_008705.17 14971274
ss23038648 WIBR_S227_SNPS_200403.chr10.NT_077569.2_9386178 A/G 2 rs9943305 0 10 14981283 NT_008705.17 14971283
ss23038649 WIBR_S227_SNPS_200403.chr10.NT_077569.2_9386296 A/G 2 rs9943306 0 10 14981401 NT_008705.17 14971401
ss23038662 WIBR_S227_SNPS_200403.chr10.NT_008705.15_5284106 A/G 2 rs9943398 0 10 23019852 NT_008705.17 23009852
ss23038663 WIBR_S227_SNPS_200403.chr10.NT_008705.15_5284627 A/G 2 rs9943403 0 10 23020373 NT_008705.17 23010373
ss23038657 WIBR_S227_SNPS_200403.chr10.NT_008705.15_18331213 C/T 2 rs9943372 0 10 36066960 NT_008705.17 36056960
ss23038658 WIBR_S227_SNPS_200403.chr10.NT_033985.6_931611 A/G 2 rs3097566 1 10 43032850 NT_030059.14 1339329
ss23038651 WIBR_S227_SNPS_200403.chr10.NT_008583.16_27371418 A/T 2 rs9943331 0 10 77060505 NT_030059.14 35366984
ss23038652 WIBR_S227_SNPS_200403.chr10.NT_030059.11_7297999 A/C 2 rs7089780 0 10 86789726 NT_030059.14 45096205
ss23038650 WIBR_S227_SNPS_200403.chr10.NT_030059.11_39690791 C/T 2 rs9943318 0 17 39337450 NT_010783.16 12401470
ss23038653 WIBR_S227_SNPS_200403.chr10.NT_008583.16_20942266 A/G 2 rs879229045 0 2 127353598 NT_005403.18 32857583
ss23038636 WIBR_S227_SNPS_200403.chr1.NT_022052.2_145605 A/G 2 rs9943116 0 7 31931657 NT_007819.18 31921657
ss23038640 WIBR_S227_SNPS_200403.chr1.NT_026943.13_11452469 G/T 2 N.D. N.D.
ss23038641 WIBR_S227_SNPS_200403.chr1.NT_004671.15_5865688 C/G 3 N.D. N.D.
ss23038654 WIBR_S227_SNPS_200403.chr10.NT_077567.3_22177 C/T 2 N.D. N.D.
ss23038655 WIBR_S227_SNPS_200403.chr10.NT_077567.3_22307 C/T 2 N.D. N.D.
ss23038656 WIBR_S227_SNPS_200403.chr10.NT_077567.3_22416 C/T 3 N.D. N.D.
ss23038661 WIBR_S227_SNPS_200403.chr10.NT_077567.3_22604 C/T 2 N.D. N.D.
ss23038634 WIBR_S227_SNPS_200403.chr1.NT_022052.2_42317 A/G 2 rs9943035 0 N.D. N.D.
ss23038644 WIBR_S227_SNPS_200403.chr1.NT_022052.2_42325 A/G 2 rs9943241 0 N.D. N.D.
ss23038643 WIBR_S227_SNPS_200403.chr1.NT_022052.2_42258 A/T 2 rs879050244 0 N.D. N.D.
30 of 2657 subsnp's starting at ss23038642. ss# starting at ss

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