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View SNP Submission Batch
Submitter Handle:WI_SSAHASNP
Submitter Batch ID:WIBR_S228_SNPS_200403
Submitter Method ID:WIBR_S228_SNPS_200310
Citation:SNPs detected by comparing chromosome Y reads to NCBI build 34 Genomic Reference Sequence using SsahaSNPSSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:693


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss23041298 WIBR_S228_SNPS_200403.chr1.NT_004511.16_906364 A/G 2 rs9782896 0 1 30495116 NT_032977.10 29909128
ss23041304 WIBR_S228_SNPS_200403.chr1.NT_032977.6_19713061 C/T 2 rs9783022 0 1 57684318 NT_032977.10 57098330
ss23041301 WIBR_S228_SNPS_200403.chr1.NT_026943.13_105275 C/T 2 rs9782986 0 1 74819417 NT_032977.10 74233429
ss23041307 WIBR_S228_SNPS_200403.chr1.NT_077389.2_300948 C/T 2 rs6600681 0 1 144976532 NT_004487.20 1791945
ss23041310 WIBR_S228_SNPS_200403.chr1.NT_077389.2_301061 A/C 2 rs2772047 1 1 144976645 NT_004487.20 1792058
ss23041294 WIBR_S228_SNPS_200403.chr1.NT_004487.16_13448929 A/C 2 rs9782952 0 1 184431298 NT_004487.20 41246711
ss23041311 WIBR_S228_SNPS_200403.chr1.NT_004487.16_14600519 A/T 2 rs9783082 0 1 185582890 NT_004487.20 42398303
ss23041303 WIBR_S228_SNPS_200403.chr1.NT_021877.16_14597255 A/C 3 rs9783020 0 1 220988214 NT_004487.20 77803627
ss23041312 WIBR_S228_SNPS_200403.chr10.NT_008705.15_14864937 A/G 3 rs9783132 0 10 32600684 NT_008705.17 32590684
ss23041316 WIBR_S228_SNPS_200403.chr10.NT_033985.6_179243 C/G 2 rs4070350 0 10 38637332 NT_008705.17 38627332
ss23041319 WIBR_S228_SNPS_200403.chr10.NT_033985.6_163567 C/T 2 rs9783232 0 10 42264806 NT_030059.14 571285
ss23041315 WIBR_S228_SNPS_200403.chr10.NT_033985.6_179033 C/G 2 rs9783165 0 10 42280272 NT_030059.14 586751
ss23041314 WIBR_S228_SNPS_200403.chr10.NT_030772.9_21905 C/T 2 rs3013985 0 10 47541363 NT_030059.14 5847842
ss23041318 WIBR_S228_SNPS_200403.chr10.NT_008583.16_11566704 C/T 2 rs9783221 0 10 61255791 NT_030059.14 19562270
ss23041317 WIBR_S228_SNPS_200403.chr10.NT_030059.11_11028595 C/T 2 rs9783186 0 10 90520322 NT_030059.14 48826801
ss23041320 WIBR_S228_SNPS_200403.chr10.NT_030059.11_15252802 C/T 2 rs9783239 0 10 94744519 NT_030059.14 53050998
ss23041292 WIBR_S228_SNPS_200403.chr1.NT_077930.1_194973 A/C 2 rs9777885 0 11 54802768 NT_167190.2 277694
ss23041313 WIBR_S228_SNPS_200403.chr10.NT_030059.11_39304772 A/C 2 rs9783144 0 6 143666705 NT_025741.16 83436771
ss23041291 WIBR_S228_SNPS_200403.chr1.NT_004487.16_3629905 A/G 2 N.D. N.D.
ss23041296 WIBR_S228_SNPS_200403.chr1.NT_022071.12_48382 A/T 2 N.D. N.D.
ss23041297 WIBR_S228_SNPS_200403.chr1.NT_022071.12_48919 C/T 2 N.D. N.D.
ss23041299 WIBR_S228_SNPS_200403.chr1.NT_022071.12_48669 A/G 3 N.D. N.D.
ss23041308 WIBR_S228_SNPS_200403.chr1.NT_022071.12_48784 C/T 3 N.D. N.D.
ss23041309 WIBR_S228_SNPS_200403.chr1.NT_022071.12_48984 C/G 2 N.D. N.D.
ss23041300 WIBR_S228_SNPS_200403.chr1.NT_022071.12_48897 A/G 3 rs7412974 1 N.D. N.D.
ss23041293 WIBR_S228_SNPS_200403.chr1.NT_077930.1_93548 C/T 2 rs9782951 0 N.D. N.D.
ss23041295 WIBR_S228_SNPS_200403.chr1.NT_077930.1_93705 C/T 2 rs9782953 0 N.D. N.D.
ss23041302 WIBR_S228_SNPS_200403.chr1.NT_077930.1_93553 A/T 2 rs9782991 0 N.D. N.D.
ss23041305 WIBR_S228_SNPS_200403.chr1.NT_077930.1_93404 A/G 2 rs9783056 0 N.D. N.D.
ss23041306 WIBR_S228_SNPS_200403.chr1.NT_077930.1_93641 G/T 2 rs9783058 0 N.D. N.D.
30 of 693 subsnp's starting at ss23041298. ss# starting at ss

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