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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:GCLC-PDR90-101404
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:202


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss28529496 GCLC-017675 A/G 180 rs17885332 0 6 53529354 NT_007592.16 53469354
ss28529495 GCLC-017548 C/T 174 rs17885968 0 6 53529481 NT_007592.16 53469481
ss28529494 GCLC-017501 A/T 174 rs17881111 0 6 53529528 NT_007592.16 53469528
ss28529493 GCLC-017461 A/G 174 rs9474583 1 6 53529568 NT_007592.16 53469568
ss28529492 GCLC-017393 A/G 172 rs17879712 0 6 53529636 NT_007592.16 53469636
ss28529491 GCLC-017385 A/G 172 rs17879993 0 6 53529644 NT_007592.16 53469644
ss28529490 GCLC-017363 C/T 154 rs17883872 0 6 53529666 NT_007592.16 53469666
ss28529489 GCLC-017003 A/G 172 rs2268328 1 6 53530026 NT_007592.16 53470026
ss28529488 GCLC-016825 G/T 132 rs17882530 0 6 53530204 NT_007592.16 53470204
ss28529487 GCLC-003856 A/T 150 rs17885448 0 6 53543173 NT_007592.16 53483173
ss28529486 GCLC-003835 C/G 168 rs17880146 0 6 53543194 NT_007592.16 53483194
ss28529485 GCLC-003827 A/G 168 rs17881238 0 6 53543202 NT_007592.16 53483202
ss28529484 GCLC-003329 C/T 178 rs17878714 0 6 53543700 NT_007592.16 53483700
ss28529483 GCLC-003304 G/T 178 rs17878942 0 6 53543725 NT_007592.16 53483725
ss28529482 GCLC-003151 A/G 176 rs3799700 1 6 53543878 NT_007592.16 53483878
ss28529481 GCLC-003038 C/T 176 rs510088 1 6 53543991 NT_007592.16 53483991
ss28529480 GCLC-002967 A/T 176 rs17885084 0 6 53544062 NT_007592.16 53484062
ss28529479 GCLC-002944 A/G 180 rs17882672 0 6 53544085 NT_007592.16 53484085
ss28529478 GCLC-002759 A/G 180 rs17885606 0 6 53544270 NT_007592.16 53484270
ss28529477 GCLC-002703 C/G 180 rs17880235 0 6 53544326 NT_007592.16 53484326
ss28529476 GCLC-002665 A/C 180 rs17879468 0 6 53544364 NT_007592.16 53484364
ss28529475 GCLC-002298 A/G 174 rs17879759 0 6 53544725 NT_007592.16 53484725
ss28529474 GCLC-002167 C/G 180 rs17880023 0 6 53544856 NT_007592.16 53484856
ss28529473 GCLC-001784 C/T 162 rs17883901 0 6 53545239 NT_007592.16 53485239
ss28529472 GCLC-001716 A/G 154 rs17882314 0 6 53545307 NT_007592.16 53485307
ss28529471 GCLC-001683 A/C 140 rs17885202 0 6 53545340 NT_007592.16 53485340
ss28529470 GCLC-001318 A/C 154 rs17880108 0 6 53545705 NT_007592.16 53485705
ss28529469 GCLC-001297 C/T 154 rs9474590 1 6 53545726 NT_007592.16 53485726
ss28529468 GCLC-001261 A/G 158 rs17880357 0 6 53545762 NT_007592.16 53485762
ss28529467 GCLC-000900 C/T 152 rs17878693 0 6 53546123 NT_007592.16 53486123
30 of 202 subsnp's starting at ss28529496. ss# starting at ss

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