NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:PGA-UW-FHCRC
Submitter Batch ID:LU-AFRICAN-121304
Submitter Method ID:METHOD-E
Citation:SeattleSNPs. NHLBI Program for Genomic Applications HL66682
Population:PGA-AFRICAN-PANEL
Comment:These SNPs were generated as part of the NHLBI Program for Genomic Applications (PGA) to develop genomic resources distributed to the research community. Please see pga.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:35


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss32475397 LU-000085 G/T 46 rs2927479 1 19 44806629 NT_011109.17 17565755
ss32475398 LU-000171 G/T 48 rs28399594 0 19 44806715 NT_011109.17 17565841
ss32475400 LU-000234 A/G 48 rs28399596 0 19 44806778 NT_011109.17 17565904
ss32475402 LU-000518 C/G 48 rs2965161 1 19 44807062 NT_011109.17 17566188
ss32475403 LU-001722 C/T 38 rs2927478 1 19 44808266 NT_011109.17 17567392
ss32475404 LU-001946 C/G 48 rs8113171 0 19 44808490 NT_011109.17 17567616
ss32475405 LU-002128 -/GG 48 rs397844216 0 19 44808671 NT_011109.17 17567797
ss32475406 LU-002237 C/G 46 rs2967671 0 19 44808779 NT_011109.17 17567905
ss32475413 LU-003919 C/T 48 rs2927477 1 19 44810458 NT_011109.17 17569584
ss32475414 LU-003941 C/T 48 rs28399603 0 19 44810480 NT_011109.17 17569606
ss32475416 LU-004452 A/G 42 rs2927476 1 19 44810991 NT_011109.17 17570117
ss32475417 LU-004497 A/G 46 rs28399606 0 19 44811036 NT_011109.17 17570162
ss32475418 LU-004528 C/T 48 rs28399607 0 19 44811067 NT_011109.17 17570193
ss32475419 LU-004971 C/T 48 rs7249750 0 19 44811510 NT_011109.17 17570636
ss32475420 LU-005323 C/T 48 rs28739586 0 19 44811862 NT_011109.17 17570988
ss32475427 LU-007008 C/T 48 rs3810141 1 19 44813547 NT_011109.17 17572673
ss32475428 LU-007011 C/T 48 rs3810140 1 19 44813550 NT_011109.17 17572676
ss32475431 LU-007293 C/G 48 rs28399612 0 19 44813832 NT_011109.17 17572958
ss32475432 LU-007342 C/T 46 rs28399613 0 19 44813881 NT_011109.17 17573007
ss32475440 LU-008357 G/T 46 rs2968180 1 19 44814896 NT_011109.17 17574022
ss32475442 LU-008768 A/C 48 rs2927446 1 19 44815307 NT_011109.17 17574433
ss32475451 LU-012109 A/G 48 rs28399627 0 19 44818648 NT_011109.17 17577774
ss32475456 LU-012948 A/G 48 rs1135062 0 19 44819487 NT_011109.17 17578613
ss32475459 LU-013277 C/T 48 rs3669 0 19 44819816 NT_011109.17 17578942
ss32475460 LU-013386 -/CATCCTCATCCCCAACT 48 rs28399634 0 19 44819925 NT_011109.17 17579051
ss32475461 LU-013447 A/G 48 rs28399635 0 19 44819986 NT_011109.17 17579112
ss32475463 LU-014342 A/G 46 rs28399637 0 19 44820881 NT_011109.17 17580007
ss32475465 LU-014724 C/T 48 rs7026 0 19 44821259 NT_011109.17 17580385
ss32475469 LU-015167 C/T 42 rs28399641 0 19 44821701 NT_011109.17 17580827
ss32475425 LU-006537 -/AGG 48 rs869263519 0 N.D. N.D.
30 of 35 subsnp's starting at ss32475397. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement