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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CTNNAL1-PDR90-020805
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:148


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss35035546 CTNNAL1-016527 C/T 178 rs12003817 1 9 108998924 NT_008470.20 40778372
ss35035545 CTNNAL1-016502 A/G 178 rs4978381 1 9 108998949 NT_008470.20 40778397
ss35035544 CTNNAL1-016325 A/C 178 rs28361109 0 9 108999126 NT_008470.20 40778574
ss35035543 CTNNAL1-016151 A/G 178 rs4978382 1 9 108999300 NT_008470.20 40778748
ss35035542 CTNNAL1-015947 A/G 176 rs17792842 1 9 108999504 NT_008470.20 40778952
ss35035541 CTNNAL1-015875 A/T 176 rs28361108 0 9 108999576 NT_008470.20 40779024
ss35035540 CTNNAL1-015721 A/T 176 rs11789252 1 9 108999730 NT_008470.20 40779178
ss35035539 CTNNAL1-015638 A/G 176 rs12348528 1 9 108999813 NT_008470.20 40779261
ss35035538 CTNNAL1-015629 C/T 176 rs11793272 1 9 108999822 NT_008470.20 40779270
ss35035537 CTNNAL1-015556 A/G 176 rs28361107 0 9 108999895 NT_008470.20 40779343
ss35035536 CTNNAL1-015346 A/G 176 rs28361106 0 9 109000105 NT_008470.20 40779553
ss35035535 CTNNAL1-015344 A/G 176 rs28361105 0 9 109000107 NT_008470.20 40779555
ss35035534 CTNNAL1-015324 A/T 176 rs10979648 1 9 109000127 NT_008470.20 40779575
ss35035533 CTNNAL1-003122 C/G 162 rs28361103 0 9 109012329 NT_008470.20 40791777
ss35035532 CTNNAL1-003095 A/T 162 rs28361102 0 9 109012356 NT_008470.20 40791804
ss35035531 CTNNAL1-002706 C/T 174 rs11789611 1 9 109012745 NT_008470.20 40792193
ss35035530 CTNNAL1-002181 -/CCT 152 rs10538092 1 9 109013268 NT_008470.20 40792716
ss35035529 CTNNAL1-001975 C/G 170 rs28361101 0 9 109013476 NT_008470.20 40792924
ss35035528 CTNNAL1-001964 A/G 168 rs7032236 1 9 109013487 NT_008470.20 40792935
ss35035527 CTNNAL1-001762 -/G 164 rs28361100 0 9 109013689 NT_008470.20 40793137
ss35035526 CTNNAL1-001608 C/G 174 rs28361099 0 9 109013843 NT_008470.20 40793291
ss35035525 CTNNAL1-001536 A/G 176 rs28361098 0 9 109013915 NT_008470.20 40793363
ss35035524 CTNNAL1-001507 C/T 176 rs1333344 1 9 109013944 NT_008470.20 40793392
ss35035523 CTNNAL1-001142 A/G 176 rs765427 1 9 109014309 NT_008470.20 40793757
ss35035522 CTNNAL1-000753 G/T 176 rs1412993 1 9 109014698 NT_008470.20 40794146
ss35035521 CTNNAL1-000681 A/C 178 rs28361097 0 9 109014770 NT_008470.20 40794218
ss35035520 CTNNAL1-000374 C/T 178 rs28361096 0 9 109015077 NT_008470.20 40794525
ss35035519 CTNNAL1-000347 G/T 178 rs28361095 0 9 109015104 NT_008470.20 40794552
ss35035518 CTNNAL1-000264 -/TTAT 172 rs28361094 0 9 109015184 NT_008470.20 40794632
ss35035517 CTNNAL1-000211 -/GCTA 176 rs16401 1 9 109015237 NT_008470.20 40794685
30 of 148 subsnp's starting at ss35035546. ss# starting at ss

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