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View SNP Submission Batch
Submitter Handle:KWOK
Submitter Batch ID:OVLP-1-87
Submitter Method ID:OverlapSnpDetectionWithPolyBayes
Citation:A general approach to single-nucleotide polymorphism discoveryOverlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
Comment:not supplied
Batch Total SubSNP(ss) Count:8
Method Extra Detail:Success rate is assigned as the SNP probability score computed by the POLYBAYES SNP discovery programOverlap detection parameters MinTotalOverlapLength:6000 MinDiscrepancyRate:0.002 MaxDiscrepancyRate:0.0001SNP detection parameters (PolyBayes) ExpectedPolymorphismRateBetweenPairs:0.001SUCCESS_RATE:87


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss48016 OVLP-120314 G/T 4 rs42385 1 16 6486932 NT_010393.17 6476932
ss48015 OVLP-120307 A/C 4 rs42384 0 16 6495837 NT_010393.17 6485837
ss48012 OVLP-97671 A/G 4 rs27923 0 16 11159901 NT_010393.17 11149901
ss48009 OVLP-10998 A/G 4 rs42380 0 16 52467784 NT_010498.16 6087102
ss48011 OVLP-87320 C/G 4 rs42381 0 3 142976159 NT_005612.17 49270585
ss48010 OVLP-27478 C/G 4 rs27922 1 5 14448784 NT_006576.17 14438784
ss48013 OVLP-104688 A/T 4 rs42382 0 7 94080240 NT_007933.16 31573461
ss48014 OVLP-115636 A/T 4 rs42383 0 7 116817349 NT_007933.16 54310570
8 of 8 subsnp's starting at ss48016.This is the last page.

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