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View SNP Submission Batch
Submitter Handle:KWOK
Submitter Batch ID:OVLP-1-84
Submitter Method ID:OverlapSnpDetectionWithPolyBayes
Citation:A general approach to single-nucleotide polymorphism discoveryOverlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
Comment:not supplied
Batch Total SubSNP(ss) Count:6
Method Extra Detail:Success rate is assigned as the SNP probability score computed by the POLYBAYES SNP discovery programOverlap detection parameters MinTotalOverlapLength:6000 MinDiscrepancyRate:0.002 MaxDiscrepancyRate:0.0001SNP detection parameters (PolyBayes) ExpectedPolymorphismRateBetweenPairs:0.001SUCCESS_RATE:84


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss48197 OVLP-103557 G/T 4 rs39955 0 5 50891667 NT_034772.7 781860
ss48193 OVLP-19184 A/C 4 rs28033 0 5 54179019 NT_034772.7 4069212
ss48196 OVLP-92802 A/C 4 rs42493 1 5 66178078 NT_034772.7 16068271
ss48192 OVLP-11509 A/G 4 rs28096 0 5 96773540 NT_034772.7 46663733
ss48195 OVLP-91652 C/T 4 rs27971 1 5 98578614 NT_034772.7 48468807
ss48194 OVLP-28083 C/G 4 rs27970 1 5 103151019 NT_034772.7 53041212
6 of 6 subsnp's starting at ss48197.This is the last page.

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