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dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:PTEN-EGP_YORUB-060105
Submitter Method ID:METHOD-E
Citation:NIEHS Envirommental Genome Project (EGP) - (N01 ES-15478)
Population:EGP_YORUB-PANEL
Comment:The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:193


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss38349666 PTEN-001933 A/C 6 rs34149102 0 10 87863443 NT_030059.14 46169922
ss38349667 PTEN-002056 A/G 8 rs1044322 1 10 87863566 NT_030059.14 46170045
ss38349668 PTEN-002369 A/G 16 rs35736544 0 10 87863879 NT_030059.14 46170358
ss38349669 PTEN-002429 -/GGC 20 rs34413673 0 10 87863938 NT_030059.14 46170417
ss38349670 PTEN-002452 A/G 20 rs12573787 0 10 87863959 NT_030059.14 46170438
ss38349671 PTEN-002953 C/G 20 rs11202592 0 10 87864461 NT_030059.14 46170940
ss38349672 PTEN-003476 C/T 24 rs34370865 0 10 87864984 NT_030059.14 46171463
ss38349673 PTEN-003498 C/T 24 rs34308750 0 10 87865006 NT_030059.14 46171485
ss38349675 PTEN-003969 A/G 24 rs34452287 0 10 87865477 NT_030059.14 46171956
ss38349676 PTEN-004317 A/G 24 rs35274268 0 10 87865825 NT_030059.14 46172304
ss38349677 PTEN-004462 -/AA 24 rs397844451 0 10 87865969 NT_030059.14 46172448
ss38349678 PTEN-004793 A/T 24 rs35930911 0 10 87866299 NT_030059.14 46172778
ss38349679 PTEN-005116 -/C 24 rs397701299 0 10 87866621 NT_030059.14 46173100
ss38349680 PTEN-011407 C/T 22 rs34490612 0 10 87872912 NT_030059.14 46179391
ss38349681 PTEN-011573 A/G 22 rs35451923 0 10 87873078 NT_030059.14 46179557
ss38349682 PTEN-011969 C/T 22 rs34370136 0 10 87873474 NT_030059.14 46179953
ss38349683 PTEN-012027 G/T 22 rs35922336 0 10 87873532 NT_030059.14 46180011
ss38349684 PTEN-012045 C/T 22 rs34453563 0 10 87873550 NT_030059.14 46180029
ss38349685 PTEN-012487 A/T 24 rs34784775 0 10 87873992 NT_030059.14 46180471
ss38349686 PTEN-012921 C/T 24 rs35032095 0 10 87874426 NT_030059.14 46180905
ss38349687 PTEN-013003 G/T 24 rs34120676 0 10 87874508 NT_030059.14 46180987
ss38349688 PTEN-013182 A/G 22 rs34260450 0 10 87874687 NT_030059.14 46181166
ss38349689 PTEN-013432 -/A 24 rs35830208 0 10 87874936 NT_030059.14 46181415
ss38349690 PTEN-013701 C/T 24 rs34248932 0 10 87875205 NT_030059.14 46181684
ss38349691 PTEN-013886 C/T 24 rs35468469 0 10 87875390 NT_030059.14 46181869
ss38349692 PTEN-014024 A/G 24 rs34771112 0 10 87875528 NT_030059.14 46182007
ss38349693 PTEN-014561 C/G 24 rs35795217 0 10 87876065 NT_030059.14 46182544
ss38349694 PTEN-014610 A/C 24 rs34970615 0 10 87876114 NT_030059.14 46182593
ss38349695 PTEN-014734 -/ATTA 24 rs34571675 0 10 87876238 NT_030059.14 46182717
ss38349674 PTEN-003961 -/GTG 24 rs869164427 0 N.D. N.D.
30 of 193 subsnp's starting at ss38349666. ss# starting at ss