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View SNP Submission Batch
Submitter Handle:HGBASE
Submitter Batch ID:010706_Genomic
Submitter Method ID:HGBASE_EXCHANGE
Citation:HGBASE: a database of SNPs and other variations in and around human genesHuman genetic bi-allelic sequences (HGBASE), a database of intra-genic polymorphisms
Comment:SNP obtained from Human Genic Bi-Allelic SEquences (HGBASE) Database For more details see Method and HGBASE website (http://hgbase.cgr.ki.se/)
Batch Total SubSNP(ss) Count:6468


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss3182242 STR000063443 (CA)12/13/14/15/16/17/18/19/20/21/22/23/24/25/26/27 N.D rs2234662 0 1 206773587 NT_004487.20 63589000
ss3182235 STR000063430 (CA)13/14/15 N.D rs2234655 0 1 206776429 NT_004487.20 63591842
ss3182246 SNP000063449 C/T N.D rs2234666 0 11 116822382 NT_033899.9 28819486
ss3182228 SNP000063419 A/C N.D rs2234649 0 12 6342197 NT_009759.17 6332197
ss3182236 SNP000063437 C/G N.D rs2234656 0 16 1241799 NT_010393.17 1231799
ss3182220 SNP000063403 C/T N.D rs1141970 0 16 1241849 NT_010393.17 1231849
ss3182221 SNP000063404 C/G N.D rs2234645 0 16 1242002 NT_010393.17 1232002
ss3182241 SNP000063442 C/T N.D rs2234661 0 16 1242050 NT_010393.17 1232050
ss3182229 SNP000063420 C/T N.D rs2234650 0 2 102141867 NT_005403.18 7645852
ss3182230 SNP000063421 C/T N.D rs2234651 0 2 102141893 NT_005403.18 7645878
ss3182233 STR000063425 (GAGGGGGCGGGTCGTGGTTGTGGGTTTTTGGGTAGGACATTCAGAG)5/9/18 N.D rs2234653 0 2 112777013 NT_005403.18 18280998
ss3182224 SNP000063407 C/T N.D rs1143634 0 2 112832813 NT_005403.18 18336798
ss3182232 SNP000063423 A/G N.D rs1143633 0 2 112832890 NT_005403.18 18336875
ss3182225 SNP000063408 C/T N.D rs419598 0 2 113129630 NT_005403.18 18633615
ss3182226 SNP000063409 C/T N.D rs423904 0 2 113129685 NT_005403.18 18633670
ss3182243 STR000063444 (ATCCTGGGGAAAGTGAGGGAAATATGGACATCACATGGAACAACATCCAGGAGACTCAGGCCTCTAGGAGTAACTGGGTAGTGTGC)2/3/4/5/6 N.D rs2234663 0 2 113130529 NT_005403.18 18634514
ss3182227 SNP000063412 C/T N.D rs2234648 0 5 132673446 NT_034772.7 82563639
ss3182245 STR000063446 (GAAGCAAGATGGCCTGTTGGGAGGCTACCACAGTAAACCAGGCTAGAGATGATGGTGGCGTGGACAGAAT)2/3 N.D rs2234665 0 5 132680584 NT_034772.7 82570777
ss3182217 SNP000063400 A/G N.D N.D. N.D.
ss3182218 IND000063401 -/A N.D N.D. N.D.
ss3182219 SNP000063402 C/T N.D N.D. N.D.
ss3182222 SNP000063405 A/T N.D N.D. N.D.
ss3182223 IND000063406 -/C N.D N.D. N.D.
ss3182231 SNP000063422 C/T N.D N.D. N.D.
ss3182234 SNP000063426 C/G N.D N.D. N.D.
ss3182237 SNP000063438 C/T N.D N.D. N.D.
ss3182238 SNP000063439 A/G N.D N.D. N.D.
ss3182239 SNP000063440 C/T N.D N.D. N.D.
ss3182240 SNP000063441 G/T N.D N.D. N.D.
ss3182244 STR000063445 (GT)39/45/50 N.D N.D. N.D.
30 of 6468 subsnp's starting at ss3182242. ss# starting at ss

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