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View SNP Submission Batch
Submitter Handle:HGSV
Submitter Batch ID:NA12156-Fosmids-20070510-DIPs
Submitter Method ID:NA12156-FOSMIDS-DIPS
Citation:SSAHA: A Fast Search Method for Large DNA Databases
Comment:not supplied
Batch Total SubSNP(ss) Count:183060


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss77832436 Cor12156_DIV_20070510.chr1_163394429-163394437_1 -/TGTTCAC 3 rs4068477 0 1 166693535 NT_004487.20 23508948
ss77832437 Cor12156_DIV_20070510.chr1_163394782-163394791_1 -/TATTTATT 3 rs544755889 0 1 166693888 NT_004487.20 23509301
ss77832442 Cor12156_DIV_20070510.chr1_226258155-226258156_1 -/TA 3 rs397688216 0 1 229815673 NT_167186.2 6206738
ss77832413 Cor12156_DIV_20070510.chr10_121968307-121968308_1 -/TT 3 rs56225503 0 10 120218805 NT_030059.14 78525284
ss77832414 Cor12156_DIV_20070510.chr11_20355265-20355266_1 -/TT 3 rs11368754 0 11 20377143 NT_009237.19 20317143
ss77832415 Cor12156_DIV_20070510.chr12_2547730-2547732_1 -/A 3 rs796688919 0 12 2568304 NT_009759.17 2558304
ss77832435 Cor12156_DIV_20070510.chr12_68940914-68940915_1 -/T 3 rs397932511 0 12 70260867 NT_029419.13 33025615
ss77832439 Cor12156_DIV_20070510.chr12_100055214-100055215_1 -/AA 3 rs34838052 0 12 101158968 NT_029419.13 63923716
ss77832416 Cor12156_DIV_20070510.chr13_108848791-108848792_1 -/T 3 rs397932510 0 13 109398443 NT_009952.15 23145464
ss77832441 Cor12156_DIV_20070510.chr15_33224643-33224646_1 -/GA 3 rs377168310 0 15 35145151 NT_010194.18 11868277
ss77832419 Cor12156_DIV_20070510.chr16_12582592-12582594_1 -/T 3 rs796143309 0 16 12581235 NT_010393.17 12571235
ss77832440 Cor12156_DIV_20070510.chr17_185813-185876_1 -/GGGCGACAGGGAGGAGATGGGGTTTAGAGGAGGGAAAAGAAGCTGGGACAAACATAAAAGAA 3 rs56316749 0 17 336023 NT_024972.9 276023
ss77832425 Cor12156_DIV_20070510.chr17_77038573-77038575_1 -/C 3 rs376757285 0 17 81456953 NT_010783.16 54520973
ss77832427 Cor12156_DIV_20070510.chr2_41733056-41733057_1 -/GTTTT 3 rs10680694 0 2 41594265 NT_022184.16 25448146
ss77832434 Cor12156_DIV_20070510.chr2_135321179-135321180_1 -/ATATATAT 3 rs56205493 0 2 134729877 NT_005403.18 40233862
ss77832421 Cor12156_DIV_20070510.chr2_155713110-155713119_1 -/TTTTTTTT 3 rs559810629 0 2 155031091 NT_005403.18 60535076
ss77832420 Cor12156_DIV_20070510.chr2_155713416-155713417_1 -/A 3 rs11400951 0 2 155031396 NT_005403.18 60535381
ss77832431 Cor12156_DIV_20070510.chr2_218849945-218849947_1 -/A 3 rs397987846 1 2 218159717 NT_005403.18 123663702
ss77832433 Cor12156_DIV_20070510.chr2_218850217-218850220_1 -/TG 3 rs10561707 0 2 218159989 NT_005403.18 123663974
ss77832432 Cor12156_DIV_20070510.chr2_218850223-218850228_1 -/ACTG 3 rs10561708 0 2 218159995 NT_005403.18 123663980
ss77832424 Cor12156_DIV_20070510.chr22_39176167-39176169_1 -/A 3 rs55723146 0 22 40455664 NT_011520.13 21746100
ss77832423 Cor12156_DIV_20070510.chr22_39176351-39176352_1 -/GTATGTATGTAT 3 rs55748069 0 22 40455847 NT_011520.13 21746283
ss77832429 Cor12156_DIV_20070510.chr4_165471109-165471113_1 -/TTT 3 rs796553971 0 4 164192353 NT_016354.20 105270972
ss77832428 Cor12156_DIV_20070510.chr4_165471388-165471391_1 -/TT 3 rs55938835 0 4 164192632 NT_016354.20 105271251
ss77832417 Cor12156_DIV_20070510.chr7_112263779-112263782_1 -/AA 3 rs796355520 0 7 113029774 NT_007933.16 50522995
ss77832418 Cor12156_DIV_20070510.chr7_138174554-138174555_1 -/G 3 rs397785750 0 7 139032553 NT_007933.16 76525774
ss77832438 Cor12156_DIV_20070510.chr9_1377277-1377279_1 -/C 3 rs796685735 0 9 1387278 NT_008413.19 1377278
ss77832430 Cor12156_DIV_20070510.chrX_99781428-99781431_1 -/TA 3 rs566932032 0 X 100720304 NT_011651.18 38257762
ss77832426 Cor12156_DIV_20070510.chrX_152018937-152018946_1 -/TGTGTGTG 3 rs55652215 0 X 153130742 NT_011681.17 8655136
ss77832422 Cor12156_DIV_20070510.chrX_152391982-152391998_1 -/AGAAAAGAAAAGAAA 3 rs527386993 0 X 153605681 NT_011681.17 9130075
30 of 183060 subsnp's starting at ss77832436. ss# starting at ss

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