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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:XPA-PDR90-041702
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:140


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss4390262 XPA-005272 -/GAA 156 rs3176652 0 9 97693692 NT_008470.20 29473140
ss4390261 XPA-004839 C/T 150 rs3176651 0 9 97694127 NT_008470.20 29473575
ss4390260 XPA-004788 C/T 146 rs3176650 0 9 97694178 NT_008470.20 29473626
ss4390259 XPA-004711 -/GCAC 162 rs3176649 0 9 97694252 NT_008470.20 29473700
ss4390258 XPA-004710 C/T 162 rs3176648 0 9 97694256 NT_008470.20 29473704
ss4390257 XPA-004651 C/T 162 rs3176647 0 9 97694315 NT_008470.20 29473763
ss4390256 XPA-004487 C/T 158 rs3176646 0 9 97694479 NT_008470.20 29473927
ss4390255 XPA-004188 A/C 122 rs3176645 0 9 97694778 NT_008470.20 29474226
ss4390254 XPA-003818 A/C 158 rs3176644 0 9 97695148 NT_008470.20 29474596
ss4390253 XPA-003738 -/TTTTA 176 rs3176643 0 9 97695223 NT_008470.20 29474671
ss4390252 XPA-003509 A/G 172 rs3176642 0 9 97695452 NT_008470.20 29474900
ss4390251 XPA-003484 C/T 172 rs3176641 0 9 97695477 NT_008470.20 29474925
ss4390250 XPA-003173 G/T 172 rs3176640 0 9 97695788 NT_008470.20 29475236
ss4390249 XPA-003134 G/T 172 rs3176639 0 9 97695827 NT_008470.20 29475275
ss4390248 XPA-002903 G/T 158 rs3176638 0 9 97696058 NT_008470.20 29475506
ss4390247 XPA-002680 A/G 156 rs3176637 0 9 97696281 NT_008470.20 29475729
ss4390246 XPA-002424 A/G 162 rs3176636 0 9 97696537 NT_008470.20 29475985
ss4390245 XPA-002195 A/G 164 rs3176635 0 9 97696766 NT_008470.20 29476214
ss4390244 XPA-002044 G/T 158 rs3176634 0 9 97696917 NT_008470.20 29476365
ss4390243 XPA-001934 C/G 178 rs3176633 0 9 97697027 NT_008470.20 29476475
ss4390242 XPA-001665 A/G 154 rs1800975 0 9 97697296 NT_008470.20 29476744
ss4390241 XPA-001595 A/C 178 rs3176631 0 9 97697366 NT_008470.20 29476814
ss4390240 XPA-001428 C/T 158 rs3176630 0 9 97697533 NT_008470.20 29476981
ss4390239 XPA-001168 C/T 180 rs3176629 0 9 97697793 NT_008470.20 29477241
ss4390238 XPA-000706 C/T 164 rs3176628 0 9 97698255 NT_008470.20 29477703
ss4390237 XPA-000701 C/T 164 rs3176627 0 9 97698260 NT_008470.20 29477708
ss4390236 XPA-000600 G/T 166 rs3176626 0 9 97698361 NT_008470.20 29477809
ss4390235 XPA-000535 A/G 172 rs3176625 0 9 97698426 NT_008470.20 29477874
ss4390234 XPA-000395 C/G 176 rs3176624 0 9 97698566 NT_008470.20 29478014
ss4390233 XPA-000259 G/T 170 rs3176623 0 9 97698702 NT_008470.20 29478150
30 of 140 subsnp's starting at ss4390262. ss# starting at ss

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