NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:HUMANGENOME_JCVI
Submitter Batch ID:1.54
Submitter Method ID:WGS-ASSEMBLY-ATAC-MAPPING
Citation:The diploid genome sequence of an individual human.
Population:J. Craig Venter
Comment:Whole genome shotgun sequencing and assembly was used to identify heterozygous variants. Human genome assembly comparison using ATAC were performed to identify homozygous variants.
Batch Total SubSNP(ss) Count:8623


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss96887824 1103649000175 -/A 2 rs61697575 0 14 18271847 NT_026437.13 48324
ss96887825 1103649000209 -/C 2 rs61044290 0 14 18292665 NT_026437.13 69142
ss96887826 1103649000260 -/A 2 rs35882632 0 14 18303354 NT_026437.13 79831
ss96887827 1103649000267 -/G 2 rs71431937 0 14 18306046 NT_026437.13 82523
ss96887830 1103649000288 -/T 2 rs71431939 0 14 18312980 NT_026437.13 89457
ss96887831 1103649000294 -/T 2 rs61538920 0 14 18314006 NT_026437.13 90483
ss96887832 1103649000296 CC/TT 2 rs71431941 0 14 18314566 NT_026437.13 91043
ss96887833 1103649000297 -/C 2 rs71431942 0 14 18315510 NT_026437.13 91987
ss96887834 1103649000298 -/A 2 rs71431943 0 14 18315570 NT_026437.13 92047
ss96887835 1103649000303 GA/TT 2 rs71431944 0 14 18317480 NT_026437.13 93957
ss96887836 1103649000325 -/T 2 rs56976647 0 14 18324347 NT_026437.13 100824
ss96887837 1103649000322 -/C 2 rs71431945 0 14 18324909 NT_026437.13 101386
ss96887838 1103649000380 A/G 2 rs28664708 0 14 18339846 NT_026437.13 116323
ss96887843 1103649000640 A/T 2 rs28590350 0 14 18625250 NT_026437.13 401727
ss96887844 1103649000685 -/A 2 rs71431950 0 14 18658517 NT_026437.13 434994
ss96887845 1103649000689 -/T 2 rs71431951 0 14 18659356 NT_026437.13 435833
ss96887846 1103649000704 -/CTTTC 2 rs71431952 0 14 18665370 NT_026437.13 441847
ss96887847 1103649000708 -/T 2 rs71431953 0 14 18665671 NT_026437.13 442148
ss96887848 1103649000759 -/T 2 rs35832490 1 14 18681565 NT_026437.13 458042
ss96887849 1103649000761 -/A 2 rs71431954 0 14 18689828 NT_026437.13 466305
ss96887852 1103649000810 -/C 2 rs71431957 0 14 19444879 NT_026437.13 1221356
ss96887829 1103649000283 -/TT 2 N.D. N.D.
ss96887839 1103649000426 -/TG 2 N.D. N.D.
ss96887840 1103649000446 -/TA 2 N.D. N.D.
ss96887841 1103649000437 -/T 2 N.D. N.D.
ss96887842 1103649000492 -/A 2 N.D. N.D.
ss96887850 1103649000790 AT/CC 2 N.D. N.D.
ss96887851 1103649000791 -/GTGTGTGT 2 N.D. N.D.
ss96887828 1103649000271 -/AAA 2 rs869149941 0 N.D. N.D.
ss96887823 1103649000053 -/T 2 rs869232038 0 N.D. N.D.
30 of 8623 subsnp's starting at ss96887824. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement