NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:HUMANGENOME_JCVI
Submitter Batch ID:1.19
Submitter Method ID:WGS-ASSEMBLY-ATAC-MAPPING
Citation:The diploid genome sequence of an individual human.
Population:J. Craig Venter
Comment:Whole genome shotgun sequencing and assembly was used to identify heterozygous variants. Human genome assembly comparison using ATAC were performed to identify homozygous variants.
Batch Total SubSNP(ss) Count:83214


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss98587949 1103654000000 A/T 2 rs55926606 0 5 12041 NT_006576.17 2041
ss98587950 1103654000001 C/G 2 rs28680688 0 5 12114 NT_006576.17 2114
ss98587951 1103654000002 A/G 2 rs28538767 0 5 12225 NT_006576.17 2225
ss98587954 1103654000022 C/T 2 rs28593503 0 5 14676 NT_006576.17 4676
ss98587955 1103654000023 A/T 2 rs28494547 0 5 14757 NT_006576.17 4757
ss98587956 1103654000024 A/T 2 rs28715186 0 5 16412 NT_006576.17 6412
ss98587957 1103654000025 A/T 2 rs10462724 0 5 33281 NT_006576.17 23281
ss98587958 1103654000033 C/T 2 rs4957000 1 5 51340 NT_006576.17 41340
ss98587960 1103654000054 A/G 2 rs34289507 0 5 70363 NT_006576.17 60363
ss98587961 1103654000055 C/T 2 rs13173091 0 5 83254 NT_006576.17 73254
ss98587962 1103654000057 C/G 2 rs13161351 0 5 83281 NT_006576.17 73281
ss98587963 1103654000058 C/G 2 rs4957034 0 5 83285 NT_006576.17 73285
ss98587964 1103654000060 C/T 2 rs4957035 0 5 83303 NT_006576.17 73303
ss98587965 1103654000061 A/G 2 rs28417069 0 5 83319 NT_006576.17 73319
ss98587966 1103654000062 A/C 2 rs13161377 0 5 83325 NT_006576.17 73325
ss98587967 1103654000063 A/C 2 rs71577424 0 5 83385 NT_006576.17 73385
ss98587968 1103654000064 C/T 2 rs71583018 0 5 83402 NT_006576.17 73402
ss98587969 1103654000066 A/T 2 rs141345255 0 5 83415 NT_006576.17 73415
ss98587978 1103654000076 C/G 2 rs71583027 0 5 83491 NT_006576.17 73491
ss98587971 1103654000068 C/G 2 rs71583020 0 5 83671 NT_006576.17 73671
ss98587972 1103654000069 A/G 2 rs71583021 0 5 83694 NT_006576.17 73694
ss98587976 1103654000073 C/G 2 rs71583025 0 5 83731 NT_006576.17 73731
ss98587973 1103654000070 A/G 2 rs71583022 0 5 83769 NT_006576.17 73769
ss98587974 1103654000071 A/G 2 rs71583023 0 5 83799 NT_006576.17 73799
ss98587975 1103654000072 A/C 2 rs71583024 0 5 83805 NT_006576.17 73805
ss98587970 1103654000067 A/G 2 rs71583019 0 5 84114 NT_006576.17 74114
ss98587977 1103654000075 A/G 2 rs71583026 0 5 84954 NT_006576.17 74954
ss98587959 1103654000044 A/G 2 rs566835219 0 8 92219968 NT_008046.17 6505746
ss98587952 1103654000003 C/G 2 N.D. N.D.
ss98587953 1103654000004 A/C 2 N.D. N.D.
30 of 83214 subsnp's starting at ss98587949. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement