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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:ERCC6-PDR90-123102
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:264


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss5608987 ERCC6-008660 -/GTGCT 160 rs4253021 0 10 49531325 NT_030059.14 7837804
ss5608986 ERCC6-008478 A/G 158 rs1012554 0 10 49531511 NT_030059.14 7837990
ss5608985 ERCC6-008451 A/G 158 rs4253020 0 10 49531538 NT_030059.14 7838017
ss5608984 ERCC6-008261 A/G 152 rs4253019 0 10 49531728 NT_030059.14 7838207
ss5608983 ERCC6-008175 C/T 154 rs4253018 0 10 49531814 NT_030059.14 7838293
ss5608982 ERCC6-008120 A/G 160 rs4253017 0 10 49531869 NT_030059.14 7838348
ss5608981 ERCC6-008119 C/T 176 rs4253016 0 10 49531870 NT_030059.14 7838349
ss5608980 ERCC6-008075 A/G 180 rs4253015 0 10 49531914 NT_030059.14 7838393
ss5608979 ERCC6-007892 C/T 180 rs1012553 0 10 49532097 NT_030059.14 7838576
ss5608978 ERCC6-007773 A/C 180 rs4253014 0 10 49532216 NT_030059.14 7838695
ss5608977 ERCC6-007435 A/G 158 rs4253013 0 10 49532554 NT_030059.14 7839033
ss5608976 ERCC6-007159 C/G 180 rs2228524 0 10 49532830 NT_030059.14 7839309
ss5608975 ERCC6-007014 C/G 180 rs4253012 0 10 49532975 NT_030059.14 7839454
ss5608974 ERCC6-006952 C/T 174 rs1126112 1 10 49533037 NT_030059.14 7839516
ss5608973 ERCC6-006855 C/T 174 rs4253011 0 10 49533134 NT_030059.14 7839613
ss5608972 ERCC6-006784 G/T 174 rs1964145 1 10 49533205 NT_030059.14 7839684
ss5608971 ERCC6-006631 A/G 168 rs4253010 0 10 49533358 NT_030059.14 7839837
ss5608970 ERCC6-006606 A/G 130 rs4253009 0 10 49533383 NT_030059.14 7839862
ss5608969 ERCC6-001259 C/G 166 rs4253008 0 10 49538730 NT_030059.14 7845209
ss5608968 ERCC6-001183 C/G 160 rs3750747 0 10 49538806 NT_030059.14 7845285
ss5608967 ERCC6-001179 C/T 160 rs3750746 0 10 49538810 NT_030059.14 7845289
ss5608966 ERCC6-001114 C/T 160 rs4253007 0 10 49538875 NT_030059.14 7845354
ss5608965 ERCC6-001112 G/T 158 rs3750745 0 10 49538877 NT_030059.14 7845356
ss5608964 ERCC6-001021 A/G 156 rs4253006 0 10 49538969 NT_030059.14 7845448
ss5608963 ERCC6-000965 G/T 162 rs4253005 0 10 49539025 NT_030059.14 7845504
ss5608962 ERCC6-000956 A/C 162 rs4253004 0 10 49539034 NT_030059.14 7845513
ss5608961 ERCC6-000826 A/G 170 rs4253003 0 10 49539164 NT_030059.14 7845643
ss5608960 ERCC6-000698 A/G 170 rs4253002 0 10 49539292 NT_030059.14 7845771
ss5608959 ERCC6-000497 C/G 178 rs3793784 0 10 49539493 NT_030059.14 7845972
ss5608958 ERCC6-000085 C/T 176 rs4253001 0 10 49539905 NT_030059.14 7846384
30 of 264 subsnp's starting at ss5608987. ss# starting at ss

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