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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:TNF-PDR90-011303
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:44


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss6310569 TNF-000238 G/T 162 rs4645834 0 6 31574062 NT_007592.16 31514062
ss6310570 TNF-000247 A/T 162 rs3093547 0 6 31574071 NT_007592.16 31514071
ss6310571 TNF-000542 C/T 166 rs4248157 0 6 31574366 NT_007592.16 31514366
ss6310572 TNF-000707 C/T 164 rs1799964 0 6 31574531 NT_007592.16 31514531
ss6310573 TNF-000876 A/C 158 rs1800630 0 6 31574699 NT_007592.16 31514699
ss6310574 TNF-000877 -/C 166 rs4645837 0 6 31574700 NT_007592.16 31514700
ss6310575 TNF-000882 C/T 158 rs1799724 0 6 31574705 NT_007592.16 31514705
ss6310576 TNF-000933 C/T 158 rs4248158 0 6 31574756 NT_007592.16 31514756
ss6310577 TNF-000980 A/C 166 rs4248159 0 6 31574803 NT_007592.16 31514803
ss6310578 TNF-001093 A/G 164 rs4248160 0 6 31574916 NT_007592.16 31514916
ss6310579 TNF-001167 A/C 164 rs4248161 0 6 31574990 NT_007592.16 31514990
ss6310580 TNF-001169 A/C 164 rs4248162 0 6 31574992 NT_007592.16 31514992
ss6310581 TNF-001228 C/G 164 rs4248163 0 6 31575051 NT_007592.16 31515051
ss6310582 TNF-001363 A/G 178 rs1800750 0 6 31575186 NT_007592.16 31515186
ss6310583 TNF-001431 A/G 174 rs1800629 0 6 31575254 NT_007592.16 31515254
ss6310584 TNF-001495 A/G 170 rs673 0 6 31575318 NT_007592.16 31515318
ss6310585 TNF-001501 A/G 168 rs361525 0 6 31575324 NT_007592.16 31515324
ss6310586 TNF-001748 C/T 174 rs4248164 0 6 31575571 NT_007592.16 31515571
ss6310587 TNF-001812 -/C 168 rs4645838 0 6 31575634 NT_007592.16 31515634
ss6310588 TNF-002006 G/T 170 rs2228088 0 6 31575828 NT_007592.16 31515828
ss6310589 TNF-002226 A/T 162 rs4645839 0 6 31576048 NT_007592.16 31516048
ss6310590 TNF-002228 A/G 162 rs1800610 1 6 31576050 NT_007592.16 31516050
ss6310591 TNF-002369 -/TGAA 164 rs4645841 0 6 31576190 NT_007592.16 31516190
ss6310592 TNF-002432 -/G 166 rs1799769 0 6 31576246 NT_007592.16 31516246
ss6310593 TNF-002475 -/AG 178 rs4645842 0 6 31576292 NT_007592.16 31516292
ss6310594 TNF-002969 C/T 180 rs4645843 0 6 31576785 NT_007592.16 31516785
ss6310595 TNF-003049 A/G 180 rs3093664 0 6 31576865 NT_007592.16 31516865
ss6310596 TNF-003059 A/G 180 rs4645844 0 6 31576875 NT_007592.16 31516875
ss6310597 TNF-003955 C/T 176 rs4645845 0 6 31577771 NT_007592.16 31517771
ss6310598 TNF-004174 G/T 180 rs3093667 0 6 31577990 NT_007592.16 31517990
30 of 44 subsnp's starting at ss6310569. ss# starting at ss

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